Annotations: 11HT

Cryo-EM structure of the human ZNFX1 tetramer

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF13086	AAA domain (AAA_11)	AAA domain	This family of domains contain a P-loop motif that is characteristic of the AAA superfamily. Many of the proteins in this family are conjugative transfer proteins.	Domain
A, B, C, D, E A, B, C, D, E, F	PF13087	AAA domain (AAA_12)	AAA domain	This family of domains contain a P-loop motif that is characteristic of the AAA superfamily. Many of the proteins in this family are conjugative transfer proteins.	Domain
A, B, C, D, E A, B, C, D, E, F	PF25396	ZNFX1 domain (ZNFX1)	ZNFX1 domain	This domain is found in RNA-binding proteins involved in antiviral responses and immunity against certain bacteria. Members of this family act as double-stranded RNA sensors, recognising viral RNA and interacting with mitochondrial antiviral-signalin ...	This domain is found in RNA-binding proteins involved in antiviral responses and immunity against certain bacteria. Members of this family act as double-stranded RNA sensors, recognising viral RNA and interacting with mitochondrial antiviral-signaling protein (MAVS) to initiate the type I interferon response. This domain is often found associated with Pfam:PF13086 and is predicted to adopt a mainly beta configuration.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	NFX1-type zinc finger-containing protein 1	nucleic acid conformation isomerase activity isomerase activity catalytic activity, acting on a nucleic acid helicase activity macromolecular conformation isomerase activity catalytic activity ATP-dependent activity molecular sequestering activity protein sequestering activity cation binding transition metal ion binding zinc ion binding ion binding binding nucleic acid conformation isomerase activity isomerase activity catalytic activity, acting on a nucleic acid helicase activity macromolecular conformation isomerase activity catalytic activity ATP-dependent activity molecular sequestering activity protein sequestering activity cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding RNA binding nucleic acid binding aminoacyltransferase activity ubiquitin-like protein transferase activity catalytic activity, acting on a protein acyltransferase activity ubiquitin-like protein ligase activity ubiquitin protein ligase activity transferase activity ubiquitin-protein transferase activity	regulation of defense response positive regulation of response to biotic stimulus regulation of response to biotic stimulus biological process involved in interspecies interaction between organisms response to stimulus regulation of response to external stimulus positive regulation of biological process response to biotic stimulus positive regulation of response to stimulus positive regulation of response to external stimulus positive regulation of immune response regulation of response to stress response to stress innate immune response regulation of defense response positive regulation of response to biotic stimulus regulation of response to biotic stimulus biological process involved in interspecies interaction between organisms response to stimulus regulation of response to external stimulus positive regulation of biological process response to biotic stimulus positive regulation of response to stimulus positive regulation of response to external stimulus positive regulation of immune response regulation of response to stress response to stress innate immune response regulation of immune system process response to external biotic stimulus positive regulation of immune system process regulation of biological process positive regulation of innate immune response defense response immune response response to other organism regulation of innate immune response biological regulation defense response to symbiont response to external stimulus regulation of response to stimulus immune system process defense response to other organism positive regulation of defense response activation of innate immune response regulation of immune response activation of immune response cellular response to stimulus regulation of cellular process pattern recognition receptor signaling pathway regulation of NLRP3 inflammasome complex assembly negative regulation of biological process regulation of signal transduction intracellular signal transduction cell communication cellular component biogenesis immune response-activating signaling pathway cellular component assembly inflammasome-mediated signaling pathway canonical inflammasome complex assembly signal transduction negative regulation of NLRP3 inflammasome complex assembly innate immune response-activating signaling pathway negative regulation of cellular component organization regulation of inflammasome-mediated signaling pathway negative regulation of protein-containing complex assembly regulation of pattern recognition receptor signaling pathway NLRP3 inflammasome complex assembly inflammatory response cytoplasmic pattern recognition receptor signaling pathway regulation of cellular component organization intracellular receptor signaling pathway signaling negative regulation of signaling negative regulation of cytoplasmic pattern recognition receptor signaling pathway negative regulation of intracellular signal transduction regulation of cytoplasmic pattern recognition receptor signaling pathway negative regulation of cell communication cellular component organization regulation of protein-containing complex assembly immune response-regulating signaling pathway regulation of intracellular signal transduction negative regulation of cellular process protein-containing complex assembly cellular component organization or biogenesis regulation of signaling negative regulation of response to stimulus protein-containing complex organization regulation of cellular component biogenesis negative regulation of signal transduction negative regulation of immune system process regulation of cell communication cellular process negative regulation of inflammasome-mediated signaling pathway negative regulation of viral genome replication viral life cycle negative regulation of viral process regulation of viral process regulation of viral life cycle viral genome replication viral process regulation of viral genome replication chromatin organization chromatin remodeling negative regulation of macromolecule metabolic process regulation of biosynthetic process heterochromatin formation epigenetic regulation of gene expression negative regulation of metabolic process heterochromatin organization regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulatory ncRNA-mediated gene silencing regulation of gene expression negative regulation of gene expression regulatory ncRNA-mediated heterochromatin formation biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process negative regulation of gene expression, epigenetic regulation of macromolecule biosynthetic process metabolic process macromolecule metabolic process regulation of metabolic process defense response to virus response to virus defense response to bacterium response to bacterium	membrane-bounded organelle protein-containing complex intracellular anatomical structure catalytic complex nucleus RNA-directed RNA polymerase complex nuclear protein-containing complex nuclear RNA-directed RNA polymerase complex intracellular membrane-bounded organelle transferase complex transferase complex, transferring phosphorus-containing groups intracellular organelle cellular anatomical structure organelle membrane-bounded organelle protein-containing complex intracellular anatomical structure catalytic complex nucleus RNA-directed RNA polymerase complex nuclear protein-containing complex nuclear RNA-directed RNA polymerase complex intracellular membrane-bounded organelle transferase complex transferase complex, transferring phosphorus-containing groups intracellular organelle cellular anatomical structure organelle RNA polymerase complex intracellular protein-containing complex cytoplasmic ribonucleoprotein granule intracellular membraneless organelle ribonucleoprotein granule membraneless organelle cytoplasm supramolecular complex cytoplasmic stress granule cytosol mitochondrial membrane mitochondrion membrane organelle outer membrane organelle envelope bounding membrane of organelle mitochondrial envelope mitochondrial outer membrane outer membrane organelle membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR041677	DNA2/NAM7 helicase, helicase domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR016024	Armadillo-type fold	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR045055	DNA2/NAM7-like helicase	Family
A, B, C, D, E A, B, C, D, E, F	IPR000967	Zinc finger, NF-X1-type	Domain
A, B, C, D, E A, B, C, D, E, F	IPR041679	DNA2/NAM7 helicase-like, C-terminal	Domain
A, B, C, D, E A, B, C, D, E, F	IPR046439	Zinc finger, RZ-type	Domain
A, B, C, D, E A, B, C, D, E, F	IPR057373	ZNFX1 domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR047187	Upf1-like, C-terminal helicase domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B, C, D, E A, B, C, D, E, F	: Q9P2E3	juvenile dermatomyositis multiple sclerosis pancreatic intraductal papillary-mucinous neoplasm malignant ependymoma ovarian cancer ulcerative colitis malignant pancreatic neoplasm pancreatic ductal adenocarcinoma