1SDI | pdb_00001sdi

1.65 A structure of Escherichia coli ycfC gene product

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1sdia1	All alpha proteins	YcfC-like	YcfC-like	YcfC-like	Hypothetical protein YcfC	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
A	d1sdia2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	YcfC-like	8026977	4000700	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	YcfC-like	8039356	3001080	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	DUF489	e1sdiA1	A: alpha arrays	X: YcfC-like (From Topology)	H: YcfC-like (From Topology)	T: YcfC-like	F: DUF489	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.3890.10	Mainly Alpha	Orthogonal Bundle	YcfC-like	HflD-like	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF04356	Protein of unknown function (DUF489) (DUF489)	Protein of unknown function (DUF489)	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Hypothetical protein ycfC	-	response to stimulus response to stress response to heat response to abiotic stimulus response to temperature stimulus	cell periphery cellular anatomical structure plasma membrane membrane intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR035932	HflD-like superfamily	Homologous Superfamily
A	IPR007451	High frequency lysogenization protein HflD	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.