2GNV | pdb_00002gnv

Crystal structure of non-symbiotic plant hemoglobin from rice, B10 mutant F40L

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d2gnvb_	All alpha proteins	Globin-like	Globin-like	Globins	Non-symbiotic plant hemoglobin	rice (Oryza sativa ) [TaxId: 4530 ],	SCOPe (2.08)
A	d2gnva_	All alpha proteins	Globin-like	Globin-like	Globins	Non-symbiotic plant hemoglobin	rice (Oryza sativa ) [TaxId: 4530 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Globin-like	8035842	3000554	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Globin-like	8035842	3000554	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Globin	e2gnvB1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Globin	ECOD (1.6)
A	Globin	e2gnvA1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Globin	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	1.10.490.10	Mainly Alpha	Orthogonal Bundle	Globin-like	Globins	CATH (4.3.0)
A	1.10.490.10	Mainly Alpha	Orthogonal Bundle	Globin-like	Globins	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF00042	Globin (Globin)	Globin		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Non-symbiotic hemoglobin 1	oxidoreductase activity catalytic activity oxygen binding binding small molecule binding tetrapyrrole binding heme binding cation binding ion binding metal ion binding	response to nitrate response to stimulus response to chemical response to oxygen-containing compound response to nitrogen compound response to nitric oxide response to nitrite	cellular anatomical structure intracellular anatomical structure cytoplasm membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR009050	Globin-like superfamily	Homologous Superfamily
A, B	IPR012292	Globin/Protoglobin	Homologous Superfamily
A, B	IPR019824	Leghaemoglobin, iron-binding site	Binding Site
A, B	IPR001032	Leghaemoglobin-like	Family
A, B	IPR000971	Globin	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.