2W7R | pdb_00002w7r

Structure of the PDZ domain of Human Microtubule associated serine- threonine kinase 4

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d2w7rb1	All beta proteins	PDZ domain-like	PDZ domain-like	automated matches	automated matches	HUMAN (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
B	d2w7rb2	Artifacts	Tags	Tags	Tags	C-terminal Tags	HUMAN (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
A	d2w7ra1	All beta proteins	PDZ domain-like	PDZ domain-like	automated matches	automated matches	HUMAN (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
A	d2w7ra2	Artifacts	Tags	Tags	Tags	C-terminal Tags	HUMAN (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	PDZ domain-like	8062328	3000388	SCOP2B (2022-06-29)
A	SCOP2 Family	PDZ domain	8062327	4001790	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	PDZ domain-like	8062328	3000388	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	PDZ	e2w7rB1	A: beta barrels	X: PDZ domain (From Topology)	H: PDZ domain (From Topology)	T: PDZ domain	F: PDZ	ECOD (1.6)
A	PDZ	e2w7rA1	A: beta barrels	X: PDZ domain (From Topology)	H: PDZ domain (From Topology)	T: PDZ domain	F: PDZ	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	2.30.42.10	Mainly Beta	Roll	Pdz3 Domain	PDZ domain	CATH (4.3.0)
A	2.30.42.10	Mainly Beta	Roll	Pdz3 Domain	PDZ domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF17820	PDZ domain (PDZ_6)	PDZ domain	This entry represents the PDZ domain from a wide variety of proteins.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	MICROTUBULE-ASSOCIATED SERINE/THREONINE-PROTEIN KINASE 4	cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding purine nucleotide binding anion binding adenyl nucleotide binding cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding protein serine/threonine kinase activity catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups protein serine kinase activity	cellular component organization organelle organization cellular process cellular component organization or biogenesis cytoskeleton organization cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation signal transduction intracellular signal transduction cell communication	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR041489	PDZ domain 6	Domain
A, B	IPR036034	PDZ superfamily	Homologous Superfamily
A, B	IPR011009	Protein kinase-like domain superfamily	Homologous Superfamily
A, B	IPR037711	Microtubule-associated serine/threonine-protein kinase, catalytic domain	Domain
A, B	IPR015022	Microtubule-associated serine/threonine-protein kinase, pre-PK domain	Domain
A, B	IPR000719	Protein kinase domain	Domain
A, B	IPR000961	AGC-kinase, C-terminal	Domain
A, B	IPR023142	Microtubule-associated serine/threonine-protein kinase, pre-PK domain superfamily	Homologous Superfamily
A, B	IPR001478	PDZ domain	Domain
A, B	IPR050236	Serine/threonine-protein kinases, AGC	Family
A, B	IPR008271	Serine/threonine-protein kinase, active site	Active Site

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	Pharos: O15021	pancreatic intraductal papillary-mucinous neoplasm pilocytic astrocytoma spina bifida atypical teratoid rhabdoid tumor gastric carcinoma juvenile dermatomyositis malignant ependymoma malignant pancreatic neoplasm osteosarcoma pancreatic ductal adenocarcinoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia psoriasis squamous cell lung carcinoma cystic fibrosis glioblastoma pancreatic intraductal papillary-mucinous neoplasm pilocytic astrocytoma spina bifida atypical teratoid rhabdoid tumor gastric carcinoma juvenile dermatomyositis malignant ependymoma malignant pancreatic neoplasm osteosarcoma pancreatic ductal adenocarcinoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia psoriasis squamous cell lung carcinoma cystic fibrosis glioblastoma large cell medulloblastoma malignant glioma medulloblastoma ovarian cancer pancreatic intraductal papillary-mucinous carcinoma Pick disease Sjogren syndrome Emery-Dreifuss muscular dystrophy interstitial cystitis lung cancer malignant mesothelioma myopathy ovarian endometrioid adenocarcinoma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.