3IJ2 | pdb_00003ij2

Ligand-receptor structure


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
D [auth Y]SCOP2B SuperfamilyTNF receptor-like 8039413 3000971 SCOP2B (2022-06-29)
D [auth Y]SCOP2B SuperfamilyTNF receptor-like 8039412 3000971 SCOP2B (2022-06-29)
D [auth Y]SCOP2B SuperfamilyTNF receptor-like 8039414 3000971 SCOP2B (2022-06-29)
D [auth Y]SCOP2B SuperfamilyTNF receptor-like 8039415 3000971 SCOP2B (2022-06-29)
B [auth X]SCOP2B SuperfamilyTNF receptor-like 8039414 3000971 SCOP2B (2022-06-29)
B [auth X]SCOP2B SuperfamilyTNF receptor-like 8039415 3000971 SCOP2B (2022-06-29)
B [auth X]SCOP2B SuperfamilyTNF receptor-like 8039412 3000971 SCOP2B (2022-06-29)
B [auth X]SCOP2B SuperfamilyTNF receptor-like 8039413 3000971 SCOP2B (2022-06-29)
C [auth B]SCOP2B SuperfamilyCystine-knot cytokines 8038790 3000846 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyCystine-knot cytokines 8038790 3000846 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
D [auth Y]TNFR_c6_1e3ij2Y2 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: TNF receptor-likeF: TNFR_c6_1ECOD (1.6)
D [auth Y]TNFR_c6e3ij2Y3 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: TNF receptor-likeF: TNFR_c6ECOD (1.6)
D [auth Y]UNK_F_TYPEe3ij2Y4 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: TNF receptor-likeF: UNK_F_TYPEECOD (1.6)
B [auth X]TNFR_c6_1e3ij2X2 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: TNF receptor-likeF: TNFR_c6_1ECOD (1.6)
B [auth X]TNFR_c6e3ij2X3 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: TNF receptor-likeF: TNFR_c6ECOD (1.6)
B [auth X]UNK_F_TYPEe3ij2X4 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: TNF receptor-likeF: UNK_F_TYPEECOD (1.6)
C [auth B]NGFe3ij2B1 A: few secondary structure elementsX: Cystine-knot cytokines (From Topology)H: Cystine-knot cytokines (From Topology)T: Cystine-knot cytokinesF: NGFECOD (1.6)
ANGFe3ij2A1 A: few secondary structure elementsX: Cystine-knot cytokines (From Topology)H: Cystine-knot cytokines (From Topology)T: Cystine-knot cytokinesF: NGFECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B [auth X],
D [auth Y]
PF00020TNFR/NGFR cysteine-rich region (TNFR_c6)TNFR/NGFR cysteine-rich regionDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B [auth X],
D [auth Y]
Nerve growth factor receptor (TNFR superfamily, member 16)
A,
C [auth B]
Beta-nerve growth factor