3LYX | pdb_00003lyx

Crystal structure of the PAS domain of the protein CPS_1291 from Colwellia psychrerythraea. Northeast Structural Genomics Consortium target id CsR222B

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BPASe3lyxB1 A: a+b three layersX: Profilin-likeH: sensor domains (From Topology)T: sensor domainsF: PASECOD (1.6)
APASe3lyxA1 A: a+b three layersX: Profilin-likeH: sensor domains (From Topology)T: sensor domainsF: PASECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.30.450.20 Alpha Beta 2-Layer Sandwich Beta-Lactamase PAS domainCATH (4.3.0)
A3.30.450.20 Alpha Beta 2-Layer Sandwich Beta-Lactamase PAS domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF08447PAS fold (PAS_3)PAS foldThe PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs [4]. The PAS fold appears in archaea, eubacteria and eukarya. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Sensory box/GGDEF domain protein - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR035965PAS domain superfamilyHomologous Superfamily
A, B
IPR001610PAC motifRepeat
A, B
IPR000700PAS-associated, C-terminalDomain
A, B
IPR013655PAS fold-3Domain
A, B
IPR000014PAS domainDomain
A, B
IPR000160GGDEF domainDomain
A, B
IPR043128Reverse transcriptase/Diguanylate cyclase domainHomologous Superfamily
A, B
IPR052163Diguanylate Cyclase/Regulatory ProteinFamily
A, B
IPR029787Nucleotide cyclaseHomologous Superfamily