Nanobody/VHH domain 7D12 in complex with domain III of the extracellular region of EGFR, pH 3.5
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- IMGT Antibody Annotation
- SAbDab Antibody Annotation
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Pharos: Disease Associations
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2B Superfamily | L domain-like | 8038760 | 3001010 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Growth factor receptor domain-like | 8038763 | 3000398 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Growth factor receptor domain-like | 8038763 | 3000398 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | L domain-like | 8038760 | 3001010 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | Growth factor receptor domain-like | 8038763 | 3000398 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | L domain-like | 8038760 | 3001010 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | L domain-like | 8038760 | 3001010 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | Growth factor receptor domain-like | 8038763 | 3000398 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | L domain-like | 8038760 | 3001010 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | Growth factor receptor domain-like | 8038763 | 3000398 | SCOP2B (2022-06-29) |
| K | SCOP2B Superfamily | Growth factor receptor domain-like | 8038763 | 3000398 | SCOP2B (2022-06-29) |
| K | SCOP2B Superfamily | L domain-like | 8038760 | 3001010 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Recep_L_domain | e4krmA1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: Recep_L_domain | ECOD (1.6) |
| C | Recep_L_domain | e4krmC1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: Recep_L_domain | ECOD (1.6) |
| E | Recep_L_domain | e4krmE1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: Recep_L_domain | ECOD (1.6) |
| G | GF_recep_IV,Recep_L_domain | e4krmG1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: GF_recep_IV,Recep_L_domain | ECOD (1.6) |
| I | Recep_L_domain | e4krmI1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: Recep_L_domain | ECOD (1.6) |
| K | Recep_L_domain | e4krmK1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: Recep_L_domain | ECOD (1.6) |
| B | V-set_12 | e4krmB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_12 | ECOD (1.6) |
| D | V-set_12 | e4krmD1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_12 | ECOD (1.6) |
| F | V-set_12 | e4krmF1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_12 | ECOD (1.6) |
| H | V-set_12 | e4krmH1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_12 | ECOD (1.6) |
| J | V-set_12 | e4krmJ1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_12 | ECOD (1.6) |
| L | V-set_12 | e4krmL1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_12 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
IMGT Antibody Annotation IMGT Database Homepage
| Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
|---|---|---|---|---|---|---|---|---|
| Nanobody/VHH domain 7D12 | VH | Lama glama (llama) | IGHV3S1*01, IGHJ4*01 | V-DOMAIN VH | IG | (VH) | IMGT (202545-4) |
SAbDab Antibody Annotation SAbDab Database Homepage
| Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
|---|---|---|---|---|---|
| Heavy Chain | IGHV1 | - | epidermal growth factor receptor | SAbDab (2025-11-14) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR016245 | Tyrosine protein kinase, EGF/ERB/XmrK receptor | Family | |
| IPR020635 | Tyrosine-protein kinase, catalytic domain | Domain | |
| IPR000719 | Protein kinase domain | Domain | |
| IPR032778 | Growth factor receptor domain 4 | Domain | |
| IPR006212 | Furin-like repeat | Repeat | |
| IPR017441 | Protein kinase, ATP binding site | Binding Site | |
| IPR001245 | Serine-threonine/tyrosine-protein kinase, catalytic domain | Domain | |
| IPR009030 | Growth factor receptor cysteine-rich domain superfamily | Homologous Superfamily | |
| IPR008266 | Tyrosine-protein kinase, active site | Active Site | |
| IPR036941 | Receptor L-domain superfamily | Homologous Superfamily | |
| IPR049328 | Epidermal growth factor receptor-like, transmembrane-juxtamembrane segment | Domain | |
| IPR000494 | Receptor L-domain | Domain | |
| IPR011009 | Protein kinase-like domain superfamily | Homologous Superfamily | |
| IPR006211 | Furin-like cysteine-rich domain | Domain | |
| IPR050122 | Receptor Tyrosine Kinase | Family |














