4N80 | pdb_00004n80

Crystal structure of Tse3-Tsi3 complex


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BEUF08518e4n80B1 A: a+b three layersX: Mog1p/PsbP-likeH: Mog1p/PsbP-like (From Topology)T: Mog1p/PsbP-likeF: EUF08518ECOD (1.6)
AEUF08230e4n80A1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: EUF08230ECOD (1.6)
AEUF08539e4n80A2 A: a+b complex topologyX: Lysozyme-like (From Homology)H: Lysozyme-likeT: Lysozyme-likeF: EUF08539ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.60.120.1690 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF22211Type six secretion immunity 3 domain (Tsi3)Type six secretion immunity 3 domainThis entry represents the Tsi3 domain. Tsi3 immunity protein prevents early activation of toxin Tse3. Three loops of Tsi3 deeply insert into the groove of Tse3, fully blocking its active site. This interaction serves as the structural basis for Tse3 ...This entry represents the Tsi3 domain. Tsi3 immunity protein prevents early activation of toxin Tse3. Three loops of Tsi3 deeply insert into the groove of Tse3, fully blocking its active site. This interaction serves as the structural basis for Tse3 inactivation [1,2,3].
Domain
PF22115T6SS, Peptidoglycan muramidase Tse3, catalytic domain (T6SS_Tse3_cat)T6SS, Peptidoglycan muramidase Tse3, catalytic domainThis domain is found in Peptidoglycan muramidase Tse3 from Pseudomonas aeruginosa and similar sequences from bacteria. Tse3 is a toxin secreted by the H1 type VI (H1-T6SS) secretion system into the periplasm of recipient cells. This protein degrades ...This domain is found in Peptidoglycan muramidase Tse3 from Pseudomonas aeruginosa and similar sequences from bacteria. Tse3 is a toxin secreted by the H1 type VI (H1-T6SS) secretion system into the periplasm of recipient cells. This protein degrades peptidoglycan via muramidase activity. It is organised into a small N-terminal domain with a C-terminal catalytic domain (this entry), which contains two major lobes that form an an open, accessible catalytic groove with three calcium-binding ions [1-3].
Domain
PF22120T6SS, Peptidoglycan muramidase Tse3, N-terminal domain (T6SS_Tse3_N)T6SS, Peptidoglycan muramidase Tse3, N-terminal domain- Repeat