4QI6 | pdb_00004qi6

Cellobiose dehydrogenase from Myriococcum thermophilum, MtCDH

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	CBD9-like	8084164	3002050	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	CDH-cyt	e4qi6A2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: CDH-cyt	ECOD (1.6)
A	GMC_oxred_N	e4qi6A1	A: a/b three-layered sandwiches	X: Rossmann-like	H: Rossmann-related	T: FAD/NAD(P)-binding domain	F: GMC_oxred_N	ECOD (1.6)
A	CBM_1	e4qi6A3	A: few secondary structure elements	X: omega toxin-like	H: omega toxin-related	T: omega toxin-related	F: CBM_1	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00732	GMC oxidoreductase (GMC_oxred_N)	GMC oxidoreductase	This family of proteins bind FAD as a cofactor.	Domain
A	PF00734	Fungal cellulose binding domain (CBM_1)	Fungal cellulose binding domain		Domain
A	PF05199	GMC oxidoreductase (GMC_oxred_C)	GMC oxidoreductase	This domain found associated with Pfam:PF00732.	Domain
A	PF16010	Cytochrome domain of cellobiose dehydrogenase (CDH-cyt)	Cytochrome domain of cellobiose dehydrogenase	-	Family
A	PF00890	FAD binding domain (FAD_binding_2)	FAD binding domain	This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Cellobiose dehydrogenase	binding polysaccharide binding cellulose binding carbohydrate binding oxidoreductase activity oxidoreductase activity, acting on CH-OH group of donors catalytic activity flavin adenine dinucleotide binding nucleoside phosphate binding ion binding anion binding nucleotide binding heterocyclic compound binding small molecule binding binding polysaccharide binding cellulose binding carbohydrate binding oxidoreductase activity oxidoreductase activity, acting on CH-OH group of donors catalytic activity flavin adenine dinucleotide binding nucleoside phosphate binding ion binding anion binding nucleotide binding heterocyclic compound binding small molecule binding cation binding metal ion binding	carbohydrate metabolic process polysaccharide metabolic process catabolic process polysaccharide catabolic process carbohydrate catabolic process metabolic process cellular process primary metabolic process macromolecule metabolic process macromolecule catabolic process	cellular anatomical structure extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR003953	FAD-dependent oxidoreductase 2, FAD-binding domain	Domain
A	IPR007867	Glucose-methanol-choline oxidoreductase, C-terminal	Domain
A	IPR053208	GMC Oxidoreductase Cellobiose Dehydrogenase	Family
A	IPR036188	FAD/NAD(P)-binding domain superfamily	Homologous Superfamily
A	IPR015920	Cellobiose dehydrogenase-like, cytochrome domain	Domain
A	IPR000172	Glucose-methanol-choline oxidoreductase, N-terminal	Domain
A	IPR000254	Cellulose-binding domain	Domain
A	IPR035971	Cellulose-binding domain superfamily	Homologous Superfamily

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A	PCA	Parent Component: GLN RESID: AA0031 PSI-MOD : 2-pyrrolidone-5-carboxylic acid (Gln) MOD:00040 , 2-pyrrolidone-5-carboxylic acid (Glu) MOD:00420

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.