4V2T | pdb_00004v2t

Membrane embedded pleurotolysin pore with 13 fold symmetry


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
B [auth 1]SCOP2B SuperfamilyTricorn-like 8052107 3002094 SCOP2B (2022-06-29)
B [auth 1]SCOP2B SuperfamilyMAC/CDC-like 8052038 3002081 SCOP2B (2022-06-29)
CA [auth S]SCOP2 FamilyMACPF-like 8049566 4006548 SCOP2 (2022-06-29)
CA [auth S]SCOP2 FamilyC-terminal domain of Pleurotolysin B-like 8052106 4007584 SCOP2 (2022-06-29)
CA [auth S]SCOP2 SuperfamilyMAC/CDC-like 8052038 3002081 SCOP2 (2022-06-29)
CA [auth S]SCOP2 SuperfamilyTricorn-like 8052107 3002094 SCOP2 (2022-06-29)
E [auth 4]SCOP2B SuperfamilyMAC/CDC-like 8052038 3002081 SCOP2B (2022-06-29)
E [auth 4]SCOP2B SuperfamilyTricorn-like 8052107 3002094 SCOP2B (2022-06-29)
FA [auth V]SCOP2B SuperfamilyMAC/CDC-like 8052038 3002081 SCOP2B (2022-06-29)
FA [auth V]SCOP2B SuperfamilyTricorn-like 8052107 3002094 SCOP2B (2022-06-29)
H [auth 7]SCOP2B SuperfamilyTricorn-like 8052107 3002094 SCOP2B (2022-06-29)
H [auth 7]SCOP2B SuperfamilyMAC/CDC-like 8052038 3002081 SCOP2B (2022-06-29)
IA [auth Y]SCOP2B SuperfamilyMAC/CDC-like 8052038 3002081 SCOP2B (2022-06-29)
IA [auth Y]SCOP2B SuperfamilyTricorn-like 8052107 3002094 SCOP2B (2022-06-29)
KA [auth a]SCOP2B SuperfamilyTricorn-like 8052107 3002094 SCOP2B (2022-06-29)
KA [auth a]SCOP2B SuperfamilyMAC/CDC-like 8052038 3002081 SCOP2B (2022-06-29)
N [auth D]SCOP2B SuperfamilyMAC/CDC-like 8052038 3002081 SCOP2B (2022-06-29)
N [auth D]SCOP2B SuperfamilyTricorn-like 8052107 3002094 SCOP2B (2022-06-29)
Q [auth G]SCOP2B SuperfamilyTricorn-like 8052107 3002094 SCOP2B (2022-06-29)
Q [auth G]SCOP2B SuperfamilyMAC/CDC-like 8052038 3002081 SCOP2B (2022-06-29)
T [auth J]SCOP2B SuperfamilyMAC/CDC-like 8052038 3002081 SCOP2B (2022-06-29)
T [auth J]SCOP2B SuperfamilyTricorn-like 8052107 3002094 SCOP2B (2022-06-29)
W [auth M]SCOP2B SuperfamilyTricorn-like 8052107 3002094 SCOP2B (2022-06-29)
W [auth M]SCOP2B SuperfamilyMAC/CDC-like 8052038 3002081 SCOP2B (2022-06-29)
Z [auth P]SCOP2B SuperfamilyMAC/CDC-like 8052038 3002081 SCOP2B (2022-06-29)
Z [auth P]SCOP2B SuperfamilyTricorn-like 8052107 3002094 SCOP2B (2022-06-29)
K [auth A]SCOP2B SuperfamilyMAC/CDC-like 8052038 3002081 SCOP2B (2022-06-29)
K [auth A]SCOP2B SuperfamilyTricorn-like 8052107 3002094 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth 0]Aegerolysine4v2t01 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: AegerolysinECOD (1.6)
AA [auth Q]Aegerolysine4v2tQ1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: AegerolysinECOD (1.6)
BA [auth R]Aegerolysine4v2tR1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: AegerolysinECOD (1.6)
C [auth 2]Aegerolysine4v2t21 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: AegerolysinECOD (1.6)
D [auth 3]Aegerolysine4v2t31 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: AegerolysinECOD (1.6)
DA [auth T]Aegerolysine4v2tT1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: AegerolysinECOD (1.6)
EA [auth U]Aegerolysine4v2tU1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: AegerolysinECOD (1.6)
F [auth 5]Aegerolysine4v2t51 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: AegerolysinECOD (1.6)
G [auth 6]Aegerolysine4v2t61 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: AegerolysinECOD (1.6)
GA [auth W]Aegerolysine4v2tW1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: AegerolysinECOD (1.6)
HA [auth X]Aegerolysine4v2tX1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: AegerolysinECOD (1.6)
I [auth 8]Aegerolysine4v2t81 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: AegerolysinECOD (1.6)
J [auth 9]Aegerolysine4v2t91 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: AegerolysinECOD (1.6)
JA [auth Z]Aegerolysine4v2tZ1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: AegerolysinECOD (1.6)
L [auth B]Aegerolysine4v2tB1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: AegerolysinECOD (1.6)
LA [auth b]Aegerolysine4v2tb1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: AegerolysinECOD (1.6)
M [auth C]Aegerolysine4v2tC1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: AegerolysinECOD (1.6)
MA [auth c]Aegerolysine4v2tc1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: AegerolysinECOD (1.6)
O [auth E]Aegerolysine4v2tE1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: AegerolysinECOD (1.6)
P [auth F]Aegerolysine4v2tF1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: AegerolysinECOD (1.6)
R [auth H]Aegerolysine4v2tH1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: AegerolysinECOD (1.6)
S [auth I]Aegerolysine4v2tI1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: AegerolysinECOD (1.6)
U [auth K]Aegerolysine4v2tK1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: AegerolysinECOD (1.6)
V [auth L]Aegerolysine4v2tL1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: AegerolysinECOD (1.6)
X [auth N]Aegerolysine4v2tN1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: AegerolysinECOD (1.6)
Y [auth O]Aegerolysine4v2tO1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: AegerolysinECOD (1.6)
B [auth 1]EUF07877e4v2t11 A: beta duplicates or obligate multimersX: Pleurotolysin B C-terminal domain (From Topology)H: Pleurotolysin B C-terminal domain (From Topology)T: Pleurotolysin B C-terminal domainF: EUF07877ECOD (1.6)
B [auth 1]MACPF_1e4v2t12 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPF_1ECOD (1.6)
CA [auth S]EUF07877e4v2tS1 A: beta duplicates or obligate multimersX: Pleurotolysin B C-terminal domain (From Topology)H: Pleurotolysin B C-terminal domain (From Topology)T: Pleurotolysin B C-terminal domainF: EUF07877ECOD (1.6)
CA [auth S]MACPF_1e4v2tS2 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPF_1ECOD (1.6)
E [auth 4]EUF07877e4v2t41 A: beta duplicates or obligate multimersX: Pleurotolysin B C-terminal domain (From Topology)H: Pleurotolysin B C-terminal domain (From Topology)T: Pleurotolysin B C-terminal domainF: EUF07877ECOD (1.6)
E [auth 4]MACPF_1e4v2t42 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPF_1ECOD (1.6)
FA [auth V]EUF07877e4v2tV1 A: beta duplicates or obligate multimersX: Pleurotolysin B C-terminal domain (From Topology)H: Pleurotolysin B C-terminal domain (From Topology)T: Pleurotolysin B C-terminal domainF: EUF07877ECOD (1.6)
FA [auth V]MACPF_1e4v2tV2 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPF_1ECOD (1.6)
H [auth 7]EUF07877e4v2t72 A: beta duplicates or obligate multimersX: Pleurotolysin B C-terminal domain (From Topology)H: Pleurotolysin B C-terminal domain (From Topology)T: Pleurotolysin B C-terminal domainF: EUF07877ECOD (1.6)
H [auth 7]MACPF_1e4v2t71 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPF_1ECOD (1.6)
IA [auth Y]EUF07877e4v2tY2 A: beta duplicates or obligate multimersX: Pleurotolysin B C-terminal domain (From Topology)H: Pleurotolysin B C-terminal domain (From Topology)T: Pleurotolysin B C-terminal domainF: EUF07877ECOD (1.6)
IA [auth Y]MACPF_1e4v2tY1 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPF_1ECOD (1.6)
KA [auth a]EUF07877e4v2ta2 A: beta duplicates or obligate multimersX: Pleurotolysin B C-terminal domain (From Topology)H: Pleurotolysin B C-terminal domain (From Topology)T: Pleurotolysin B C-terminal domainF: EUF07877ECOD (1.6)
KA [auth a]MACPF_1e4v2ta1 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPF_1ECOD (1.6)
N [auth D]EUF07877e4v2tD1 A: beta duplicates or obligate multimersX: Pleurotolysin B C-terminal domain (From Topology)H: Pleurotolysin B C-terminal domain (From Topology)T: Pleurotolysin B C-terminal domainF: EUF07877ECOD (1.6)
N [auth D]MACPF_1e4v2tD2 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPF_1ECOD (1.6)
Q [auth G]EUF07877e4v2tG1 A: beta duplicates or obligate multimersX: Pleurotolysin B C-terminal domain (From Topology)H: Pleurotolysin B C-terminal domain (From Topology)T: Pleurotolysin B C-terminal domainF: EUF07877ECOD (1.6)
Q [auth G]MACPF_1e4v2tG2 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPF_1ECOD (1.6)
T [auth J]EUF07877e4v2tJ2 A: beta duplicates or obligate multimersX: Pleurotolysin B C-terminal domain (From Topology)H: Pleurotolysin B C-terminal domain (From Topology)T: Pleurotolysin B C-terminal domainF: EUF07877ECOD (1.6)
T [auth J]MACPF_1e4v2tJ1 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPF_1ECOD (1.6)
W [auth M]EUF07877e4v2tM2 A: beta duplicates or obligate multimersX: Pleurotolysin B C-terminal domain (From Topology)H: Pleurotolysin B C-terminal domain (From Topology)T: Pleurotolysin B C-terminal domainF: EUF07877ECOD (1.6)
W [auth M]MACPF_1e4v2tM1 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPF_1ECOD (1.6)
Z [auth P]EUF07877e4v2tP1 A: beta duplicates or obligate multimersX: Pleurotolysin B C-terminal domain (From Topology)H: Pleurotolysin B C-terminal domain (From Topology)T: Pleurotolysin B C-terminal domainF: EUF07877ECOD (1.6)
Z [auth P]MACPF_1e4v2tP2 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPF_1ECOD (1.6)
K [auth A]EUF07877e4v2tA1 A: beta duplicates or obligate multimersX: Pleurotolysin B C-terminal domain (From Topology)H: Pleurotolysin B C-terminal domain (From Topology)T: Pleurotolysin B C-terminal domainF: EUF07877ECOD (1.6)
K [auth A]MACPF_1e4v2tA2 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPF_1ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF06355Aegerolysin (Aegerolysin)Aegerolysin- Family
PF18684Pleurotolysin B C-terminal domain (PlyB_C)Pleurotolysin B C-terminal domainThis a trefoil C-terminal beta-rich domain found in PlyB, one of the components of pleurotolysin (Ply) pore-forming protein. Ply is a membrane attack complex/perforin-like family (MACPF) protein consisting of two components, PlyA and PlyB. PlyB and P ...This a trefoil C-terminal beta-rich domain found in PlyB, one of the components of pleurotolysin (Ply) pore-forming protein. Ply is a membrane attack complex/perforin-like family (MACPF) protein consisting of two components, PlyA and PlyB. PlyB and PlyA act together to form relatively small and regular pores in liposomes. The PlyB C-terminal trefoil sits on top of the PlyA dimer [1].
Domain
PF22693Fungal MACPF-like domain (MACPF_1)Fungal MACPF-like domainThis entry represents a MACPF-like domain in uncharacterised proteins primarily found in Fungi. Domain
K [auth A]PF18684Pleurotolysin B C-terminal domain (PlyB_C)Pleurotolysin B C-terminal domainThis a trefoil C-terminal beta-rich domain found in PlyB, one of the components of pleurotolysin (Ply) pore-forming protein. Ply is a membrane attack complex/perforin-like family (MACPF) protein consisting of two components, PlyA and PlyB. PlyB and P ...This a trefoil C-terminal beta-rich domain found in PlyB, one of the components of pleurotolysin (Ply) pore-forming protein. Ply is a membrane attack complex/perforin-like family (MACPF) protein consisting of two components, PlyA and PlyB. PlyB and PlyA act together to form relatively small and regular pores in liposomes. The PlyB C-terminal trefoil sits on top of the PlyA dimer [1].
Domain
K [auth A]PF22693Fungal MACPF-like domain (MACPF_1)Fungal MACPF-like domainThis entry represents a MACPF-like domain in uncharacterised proteins primarily found in Fungi. Domain