5T96 | pdb_00005t96

Crystal structure of the infectious salmon anemia virus (ISAV) HE viral receptor complex

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	ISAV_HA_2nd	e5t96A2	A: beta sandwiches	X: jelly-roll	H: Viral protein domain (From Topology)	T: Viral protein domain	F: ISAV_HA_2nd	ECOD (1.6)
A	ISAV_HA_1st	e5t96A1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: SGNH hydrolase (From Topology)	T: SGNH hydrolase	F: ISAV_HA_1st	ECOD (1.6)
B	ISAV_HA_2nd	e5t96B2	A: beta sandwiches	X: jelly-roll	H: Viral protein domain (From Topology)	T: Viral protein domain	F: ISAV_HA_2nd	ECOD (1.6)
B	ISAV_HA_1st	e5t96B1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: SGNH hydrolase (From Topology)	T: SGNH hydrolase	F: ISAV_HA_1st	ECOD (1.6)
C	ISAV_HA_2nd	e5t96C1	A: beta sandwiches	X: jelly-roll	H: Viral protein domain (From Topology)	T: Viral protein domain	F: ISAV_HA_2nd	ECOD (1.6)
C	ISAV_HA_1st	e5t96C2	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: SGNH hydrolase (From Topology)	T: SGNH hydrolase	F: ISAV_HA_1st	ECOD (1.6)
D	ISAV_HA_2nd	e5t96D1	A: beta sandwiches	X: jelly-roll	H: Viral protein domain (From Topology)	T: Viral protein domain	F: ISAV_HA_2nd	ECOD (1.6)
D	ISAV_HA_1st	e5t96D2	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: SGNH hydrolase (From Topology)	T: SGNH hydrolase	F: ISAV_HA_1st	ECOD (1.6)
E	ISAV_HA_2nd	e5t96E1	A: beta sandwiches	X: jelly-roll	H: Viral protein domain (From Topology)	T: Viral protein domain	F: ISAV_HA_2nd	ECOD (1.6)
E	ISAV_HA_1st	e5t96E2	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: SGNH hydrolase (From Topology)	T: SGNH hydrolase	F: ISAV_HA_1st	ECOD (1.6)
F	ISAV_HA_2nd	e5t96F2	A: beta sandwiches	X: jelly-roll	H: Viral protein domain (From Topology)	T: Viral protein domain	F: ISAV_HA_2nd	ECOD (1.6)
F	ISAV_HA_1st	e5t96F1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: SGNH hydrolase (From Topology)	T: SGNH hydrolase	F: ISAV_HA_1st	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF06215	Infectious salmon anaemia virus haemagglutinin (ISAV_HA)	Infectious salmon anaemia virus haemagglutinin	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	HE protein	cation binding ion binding binding metal ion binding small molecule binding	-	cellular anatomical structure membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR010408	Haemagglutinin-esterase glycoprotein, infectious salmon anaemia virus-type	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.