5THQ | pdb_00005thq

Comprehensive Analysis of a Novel Ketoreductase for Pentangular Polyphenol Biosynthesis

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A [auth G]	SCOP2B Superfamily	SDR-like	8063266	3000038	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	SDR-like	8063266	3000038	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	SDR-like	8063266	3000038	SCOP2B (2022-06-29)
D [auth F]	SCOP2B Superfamily	SDR-like	8063266	3000038	SCOP2B (2022-06-29)
E [auth A]	SCOP2 Family	Short-chain dehydrogenases/reductases, SDR	8063265	4000029	SCOP2 (2022-06-29)
E [auth A]	SCOP2 Superfamily	SDR-like	8063266	3000038	SCOP2 (2022-06-29)
F [auth E]	SCOP2B Superfamily	SDR-like	8063266	3000038	SCOP2B (2022-06-29)
G [auth H]	SCOP2B Superfamily	SDR-like	8063266	3000038	SCOP2B (2022-06-29)
H [auth D]	SCOP2B Superfamily	SDR-like	8063266	3000038	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth G]	adh_short_C2	e5thqG1	A: a/b three-layered sandwiches	X: Rossmann-like	H: Rossmann-related	T: NAD(P)-binding Rossmann-fold domains	F: adh_short_C2	ECOD (1.6)
B	adh_short_C2	e5thqB1	A: a/b three-layered sandwiches	X: Rossmann-like	H: Rossmann-related	T: NAD(P)-binding Rossmann-fold domains	F: adh_short_C2	ECOD (1.6)
C	adh_short_C2	e5thqC1	A: a/b three-layered sandwiches	X: Rossmann-like	H: Rossmann-related	T: NAD(P)-binding Rossmann-fold domains	F: adh_short_C2	ECOD (1.6)
D [auth F]	adh_short_C2	e5thqF1	A: a/b three-layered sandwiches	X: Rossmann-like	H: Rossmann-related	T: NAD(P)-binding Rossmann-fold domains	F: adh_short_C2	ECOD (1.6)
E [auth A]	adh_short_C2	e5thqA1	A: a/b three-layered sandwiches	X: Rossmann-like	H: Rossmann-related	T: NAD(P)-binding Rossmann-fold domains	F: adh_short_C2	ECOD (1.6)
F [auth E]	adh_short_C2	e5thqE1	A: a/b three-layered sandwiches	X: Rossmann-like	H: Rossmann-related	T: NAD(P)-binding Rossmann-fold domains	F: adh_short_C2	ECOD (1.6)
G [auth H]	adh_short_C2	e5thqH1	A: a/b three-layered sandwiches	X: Rossmann-like	H: Rossmann-related	T: NAD(P)-binding Rossmann-fold domains	F: adh_short_C2	ECOD (1.6)
H [auth D]	adh_short_C2	e5thqD1	A: a/b three-layered sandwiches	X: Rossmann-like	H: Rossmann-related	T: NAD(P)-binding Rossmann-fold domains	F: adh_short_C2	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A [auth G]	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
B	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
C	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
D [auth F]	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
E [auth A]	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
F [auth E]	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
G [auth H]	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
H [auth D]	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth G], B, C, D [auth F], E [auth A], A [auth G], B, C, D [auth F], E [auth A], F [auth E], G [auth H], H [auth D]	PF13561	Enoyl-(Acyl carrier protein) reductase (adh_short_C2)	Enoyl-(Acyl carrier protein) reductase	This domain is found in Enoyl-(Acyl carrier protein) reductases.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth G], B, C, D [auth F], E [auth A], A [auth G], B, C, D [auth F], E [auth A], F [auth E], G [auth H], H [auth D]	3-oxoacyl-ACP reductase	oxidoreductase activity catalytic activity binding nucleoside phosphate binding nucleotide binding heterocyclic compound binding small molecule binding	primary metabolic process metabolic process cellular process lipid metabolic process oxoacid metabolic process carboxylic acid metabolic process small molecule metabolic process monocarboxylic acid metabolic process organic acid metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth G], B, C, D [auth F], E [auth A], A [auth G], B, C, D [auth F], E [auth A], F [auth E], G [auth H], H [auth D]	IPR036291	NAD(P)-binding domain superfamily	Homologous Superfamily
A [auth G], B, C, D [auth F], E [auth A], A [auth G], B, C, D [auth F], E [auth A], F [auth E], G [auth H], H [auth D]	IPR002347	Short-chain dehydrogenase/reductase SDR	Family
A [auth G], B, C, D [auth F], E [auth A], A [auth G], B, C, D [auth F], E [auth A], F [auth E], G [auth H], H [auth D]	IPR050259	Short-chain dehydrogenases/reductases	Family
A [auth G], B, C, D [auth F], E [auth A], A [auth G], B, C, D [auth F], E [auth A], F [auth E], G [auth H], H [auth D]	IPR020904	Short-chain dehydrogenase/reductase, conserved site	Conserved Site

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.