5YXG | pdb_00005yxg

Crystal structure of C-terminal fragment of SpaD from Lactobacillus rhamnosus GG generated by limited proteolysis

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BSdrD_B_1e5yxgB2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Prealbumin-likeF: SdrD_B_1ECOD (1.6)
BGramPos_pilinBBe5yxgB1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: GramPos_pilinBBECOD (1.6)
ASdrD_B_1e5yxgA2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Prealbumin-likeF: SdrD_B_1ECOD (1.6)
AGramPos_pilinBBe5yxgA1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: GramPos_pilinBBECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.60.40.740 Mainly Beta Sandwich Immunoglobulin-like CATH (utative)
B2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
SME Parent Component: MET

RESID:  AA0581

PSI-MOD :  L-methionine (S)-sulfoxide MOD:00721