Annotations: 6FCZ

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	TNF-like	8038828	3000061	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	TNF-like	8038832	3000061	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	TNF-like	8038834	3000061	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	C1q	e6fczA1	A: beta sandwiches	X: jelly-roll	H: TNF-like (From Topology)	T: TNF-like	F: C1q	ECOD (1.6)
B	C1q	e6fczB1	A: beta sandwiches	X: jelly-roll	H: TNF-like (From Topology)	T: TNF-like	F: C1q	ECOD (1.6)
C	C1q	e6fczC1	A: beta sandwiches	X: jelly-roll	H: TNF-like (From Topology)	T: TNF-like	F: C1q	ECOD (1.6)
D [auth H]	C1-set	e6fczH1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: C1-set	ECOD (1.6)
D [auth H]	C1-set_1	e6fczH2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: C1-set_1	ECOD (1.6)
E [auth K]	C1-set	e6fczK2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: C1-set	ECOD (1.6)
E [auth K]	C1-set_1	e6fczK1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: C1-set_1	ECOD (1.6)

IMGT Antibody Annotation IMGT Database Homepage

Chain	Protein Name	Description	Organism Name	Gene Allele Name(s)	Domain Name(s)	Receptor Type	Receptor Description	Provenance Source
D [auth H], E [auth K]	Fc-gamma-1 (IGHG1)	CH2-CH3	Homo sapiens (human)	IGHG101, IGHG102, IGHG103, IGHG104, IGHG1*05	C-DOMAIN CH2, C-DOMAIN CH3	IG	CH2-CH3	IMGT (202537-0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00386	C1q domain (C1q)	C1q domain	C1q is a subunit of the C1 enzyme complex that activates the serum complement system.	Domain
B	PF00386	C1q domain (C1q)	C1q domain	C1q is a subunit of the C1 enzyme complex that activates the serum complement system.	Domain
C	PF00386	C1q domain (C1q)	C1q domain	C1q is a subunit of the C1 enzyme complex that activates the serum complement system.	Domain
D [auth H], E [auth K]	PF07654	Immunoglobulin C1-set domain (C1-set)	Immunoglobulin C1-set domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Complement C1q subcomponent subunit A	amide binding amyloid-beta binding binding peptide binding	adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains lymphocyte mediated immunity humoral immune response response to stimulus positive regulation of biological process positive regulation of response to stimulus complement activation humoral immune response mediated by circulating immunoglobulin positive regulation of immune response leukocyte mediated immunity regulation of immune system process positive regulation of immune system process complement activation, classical pathway regulation of biological process adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains lymphocyte mediated immunity humoral immune response response to stimulus positive regulation of biological process positive regulation of response to stimulus complement activation humoral immune response mediated by circulating immunoglobulin positive regulation of immune response leukocyte mediated immunity regulation of immune system process positive regulation of immune system process complement activation, classical pathway regulation of biological process immune response biological regulation immunoglobulin mediated immune response adaptive immune response immune effector process regulation of response to stimulus immune system process B cell mediated immunity regulation of immune response activation of immune response developmental process multicellular organismal process cellular developmental process cell development developmental maturation nervous system development generation of neurons neurogenesis multicellular organism development neuron differentiation neuron remodeling anatomical structure maturation cell differentiation neuron development anatomical structure development neuron maturation cellular process cell maturation system development cellular component organization cellular component disassembly complement-mediated synapse pruning cell junction organization cell junction disassembly synapse pruning synapse organization cellular component organization or biogenesis biological process involved in interspecies interaction between organisms response to other organism defense response defense response to symbiont response to external stimulus response to biotic stimulus defense response to other organism response to stress innate immune response response to external biotic stimulus signaling cell-cell signaling cell communication visual system development pattern specification process regionalization central nervous system development sensory system development vertebrate eye-specific patterning astrocyte differentiation astrocyte activation glial cell development astrocyte development gliogenesis cell activation glial cell differentiation glial cell activation inflammatory response neuroinflammatory response myeloid leukocyte activation leukocyte activation macrophage activation leukocyte activation involved in inflammatory response microglial cell activation	protein-containing complex collagen trimer cellular anatomical structure complement component C1 complex extracellular region extrinsic component of plasma membrane synapse membrane plasma membrane synaptic membrane cell periphery extrinsic component of synaptic membrane postsynapse postsynaptic membrane protein-containing complex collagen trimer cellular anatomical structure complement component C1 complex extracellular region extrinsic component of plasma membrane synapse membrane plasma membrane synaptic membrane cell periphery extrinsic component of synaptic membrane postsynapse postsynaptic membrane cell junction plasma membrane region extrinsic component of membrane extrinsic component of postsynaptic membrane glutamatergic synapse complement component C1q complex presynaptic membrane presynapse extrinsic component of presynaptic membrane
B	Complement C1q subcomponent subunit B	-	adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains lymphocyte mediated immunity humoral immune response response to stimulus positive regulation of biological process positive regulation of response to stimulus complement activation humoral immune response mediated by circulating immunoglobulin positive regulation of immune response leukocyte mediated immunity regulation of immune system process positive regulation of immune system process complement activation, classical pathway regulation of biological process adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains lymphocyte mediated immunity humoral immune response response to stimulus positive regulation of biological process positive regulation of response to stimulus complement activation humoral immune response mediated by circulating immunoglobulin positive regulation of immune response leukocyte mediated immunity regulation of immune system process positive regulation of immune system process complement activation, classical pathway regulation of biological process immune response biological regulation immunoglobulin mediated immune response adaptive immune response immune effector process regulation of response to stimulus immune system process B cell mediated immunity regulation of immune response activation of immune response biological process involved in interspecies interaction between organisms response to other organism defense response defense response to symbiont response to external stimulus response to biotic stimulus defense response to other organism response to stress innate immune response response to external biotic stimulus cellular component organization cellular component disassembly cell junction organization cell junction disassembly synapse pruning cellular process synapse organization cellular component organization or biogenesis	protein-containing complex collagen trimer cellular anatomical structure complement component C1 complex extracellular region extracellular space blood microparticle complement component C1q complex synapse cell junction postsynapse
C	Complement C1q subcomponent subunit C	-	adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains lymphocyte mediated immunity humoral immune response response to stimulus positive regulation of biological process positive regulation of response to stimulus complement activation humoral immune response mediated by circulating immunoglobulin positive regulation of immune response leukocyte mediated immunity regulation of immune system process positive regulation of immune system process complement activation, classical pathway regulation of biological process adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains lymphocyte mediated immunity humoral immune response response to stimulus positive regulation of biological process positive regulation of response to stimulus complement activation humoral immune response mediated by circulating immunoglobulin positive regulation of immune response leukocyte mediated immunity regulation of immune system process positive regulation of immune system process complement activation, classical pathway regulation of biological process immune response biological regulation immunoglobulin mediated immune response adaptive immune response immune effector process regulation of response to stimulus immune system process B cell mediated immunity regulation of immune response activation of immune response regulation of leukocyte differentiation multicellular organismal process myeloid leukocyte differentiation regulation of cellular process cellular developmental process regulation of developmental process negative regulation of biological process cell development regulation of cell differentiation mononuclear cell differentiation regulation of cell development multicellular organism development cell differentiation anatomical structure development negative regulation of cellular process regulation of multicellular organismal process negative regulation of cell differentiation negative regulation of macrophage differentiation regulation of macrophage differentiation negative regulation of hemopoiesis developmental process regulation of multicellular organismal development negative regulation of leukocyte differentiation hemopoiesis regulation of myeloid cell differentiation negative regulation of developmental process macrophage differentiation regulation of myeloid leukocyte differentiation negative regulation of myeloid cell differentiation negative regulation of myeloid leukocyte differentiation negative regulation of cell development myeloid cell differentiation negative regulation of immune system process regulation of hemopoiesis cellular process negative regulation of multicellular organismal process leukocyte differentiation biological process involved in interspecies interaction between organisms response to other organism defense response defense response to symbiont response to external stimulus response to biotic stimulus defense response to other organism response to stress innate immune response response to external biotic stimulus regulation of granulocyte differentiation negative regulation of granulocyte differentiation granulocyte differentiation cellular component organization cellular component disassembly cell junction organization cell junction disassembly synapse pruning synapse organization cellular component organization or biogenesis	protein-containing complex collagen trimer cellular anatomical structure complement component C1 complex extracellular region extracellular space blood microparticle complement component C1q complex extrinsic component of plasma membrane synapse membrane plasma membrane presynaptic membrane synaptic membrane protein-containing complex collagen trimer cellular anatomical structure complement component C1 complex extracellular region extracellular space blood microparticle complement component C1q complex extrinsic component of plasma membrane synapse membrane plasma membrane presynaptic membrane synaptic membrane cell periphery extrinsic component of synaptic membrane presynapse extrinsic component of presynaptic membrane cell junction plasma membrane region extrinsic component of membrane postsynapse postsynaptic membrane extrinsic component of postsynaptic membrane glutamatergic synapse
D [auth H], E [auth K]	Immunoglobulin gamma-1 heavy chain	-	response to stimulus immune response immune system process adaptive immune response	cell periphery cellular anatomical structure plasma membrane membrane protein-containing complex immunoglobulin complex extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR008160	Collagen triple helix repeat	Repeat
A	IPR008983	Tumour necrosis factor-like domain superfamily	Homologous Superfamily
A	IPR050392	Collagen/C1q domain-containing	Family
A	IPR001073	C1q domain	Domain
B	IPR008160	Collagen triple helix repeat	Repeat
B	IPR008983	Tumour necrosis factor-like domain superfamily	Homologous Superfamily
B	IPR001073	C1q domain	Domain
B	IPR050392	Collagen/C1q domain-containing	Family
C	IPR008160	Collagen triple helix repeat	Repeat
C	IPR008983	Tumour necrosis factor-like domain superfamily	Homologous Superfamily
C	IPR001073	C1q domain	Domain
C	IPR050392	Collagen/C1q domain-containing	Family
D [auth H], E [auth K]	IPR003597	Immunoglobulin C1-set	Domain
D [auth H], E [auth K]	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
D [auth H], E [auth K]	IPR036179	Immunoglobulin-like domain superfamily	Homologous Superfamily
D [auth H], E [auth K]	IPR013106	Immunoglobulin V-set domain	Domain
D [auth H], E [auth K]	IPR003599	Immunoglobulin domain subtype	Domain
D [auth H], E [auth K]	IPR007110	Immunoglobulin-like domain	Domain
D [auth H], E [auth K]	IPR050380	Immune Recognition and Response Modulators	Family
D [auth H], E [auth K]	IPR003006	Immunoglobulin/major histocompatibility complex, conserved site	Conserved Site

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: P02745	C1Q deficiency IgA glomerulonephritis membranoproliferative glomerulonephritis type III hypersensitivity disease Down syndrome systemic lupus erythematosus Liver Cirrhosis, Experimental lung adenocarcinoma adrenal cortex carcinoma myopathy Becker muscular dystrophy pancreatic intraductal papillary-mucinous carcinoma Creutzfeldt Jacob disease pilocytic astrocytoma subependymal giant cell astrocytoma C1Q deficiency IgA glomerulonephritis membranoproliferative glomerulonephritis type III hypersensitivity disease Down syndrome systemic lupus erythematosus Liver Cirrhosis, Experimental lung adenocarcinoma adrenal cortex carcinoma myopathy Becker muscular dystrophy pancreatic intraductal papillary-mucinous carcinoma Creutzfeldt Jacob disease pilocytic astrocytoma subependymal giant cell astrocytoma exanthem head and neck cancer invasive ductal breast carcinoma limb-girdle muscular dystrophy lung cancer malignant glioma astrocytic tumor non-small cell lung carcinoma pancreatic intraductal papillary-mucinous neoplasm cutaneous lupus erythematosus primary membranoproliferative glomerulonephritis Duchenne muscular dystrophy ulcerative colitis juvenile dermatomyositis lung carcinoma medulloblastoma autosomal systemic lupus erythematosus type 16 ovarian cancer chronic obstructive pulmonary disease pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia dense deposit disease schizophrenia esophageal adenocarcinoma tuberculosis glioblastoma interstitial cystitis
B	Pharos: P02746	C1Q deficiency IgA glomerulonephritis Liver Cirrhosis, Experimental primary immunodeficiency disease cirrhosis of liver Down syndrome juvenile dermatomyositis lung carcinoma myocardial ischemia non-small cell lung carcinoma adrenal cortex carcinoma Sjogren syndrome Creutzfeldt Jacob disease ulcerative colitis glioblastoma C1Q deficiency IgA glomerulonephritis Liver Cirrhosis, Experimental primary immunodeficiency disease cirrhosis of liver Down syndrome juvenile dermatomyositis lung carcinoma myocardial ischemia non-small cell lung carcinoma adrenal cortex carcinoma Sjogren syndrome Creutzfeldt Jacob disease ulcerative colitis glioblastoma interstitial cystitis large cell medulloblastoma lung adenocarcinoma myopathy ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia chronic kidney disease psoriasis coronary artery disease subependymal giant cell astrocytoma cutaneous lupus erythematosus esophageal adenocarcinoma head and neck cancer invasive ductal breast carcinoma limb-girdle muscular dystrophy lung cancer medulloblastoma nasopharyngeal carcinoma ovarian cyst astrocytic tumor pilocytic astrocytoma chronic obstructive pulmonary disease schizophrenia corpus luteum cyst tuberculosis dermatomyositis
C	Pharos: P02747	C1Q deficiency Liver Cirrhosis, Experimental myopathy pancreatic ductal adenocarcinoma tuberculosis adrenal cortex carcinoma breast cancer Creutzfeldt Jacob disease Emery-Dreifuss muscular dystrophy interstitial cystitis large cell medulloblastoma lung carcinoma non-small cell lung carcinoma pilocytic astrocytoma ulcerative colitis C1Q deficiency Liver Cirrhosis, Experimental myopathy pancreatic ductal adenocarcinoma tuberculosis adrenal cortex carcinoma breast cancer Creutzfeldt Jacob disease Emery-Dreifuss muscular dystrophy interstitial cystitis large cell medulloblastoma lung carcinoma non-small cell lung carcinoma pilocytic astrocytoma ulcerative colitis astrocytic tumor Down syndrome glioblastoma invasive ductal breast carcinoma limb-girdle muscular dystrophy malignant glioma ovarian cancer subependymal giant cell astrocytoma Becker muscular dystrophy chronic obstructive pulmonary disease Duchenne muscular dystrophy head and neck cancer juvenile dermatomyositis