6JT6 | pdb_00006jt6

Crystal structure of cytochrome b domain of Pyranose Dehydrogenase from Coprinopsis cinerea

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d6jt6a_	All beta proteins	Immunoglobulin-like beta-sandwich	CBD9-like	automated matches	automated matches	Inky cap fungus (Coprinopsis cinerea ) [TaxId: 5346 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	CDH-cyt	e6jt6A1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: CDH-cyt	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.40.1210	Mainly Beta	Sandwich	Immunoglobulin-like	Cellobiose dehydrogenase, cytochrome domain	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF16010	Cytochrome domain of cellobiose dehydrogenase (CDH-cyt)	Cytochrome domain of cellobiose dehydrogenase	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Extracellular PQQ-dependent sugar dehydrogenase	oxidoreductase activity catalytic activity binding polysaccharide binding cellulose binding carbohydrate binding cation binding ion binding metal ion binding small molecule binding	carbohydrate metabolic process primary metabolic process metabolic process cellular process	cellular anatomical structure extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR011042	Six-bladed beta-propeller, TolB-like	Homologous Superfamily
A	IPR015920	Cellobiose dehydrogenase-like, cytochrome domain	Domain
A	IPR005018	DOMON domain	Domain
A	IPR011041	Soluble quinoprotein glucose/sorbosone dehydrogenase, beta-propeller domain superfamily	Homologous Superfamily
A	IPR000254	Cellulose-binding domain	Domain
A	IPR035971	Cellulose-binding domain superfamily	Homologous Superfamily
A	IPR054539	Pyrroloquinoline quinone-dependent pyranose dehydrogenase, beta-propeller domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.