6OK0 | pdb_00006ok0

Crystal structure of Sel1 repeat protein from Oxalobacter formigenes

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Sel1	e6ok0A1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: Sel1	ECOD (1.6)
B	Sel1	e6ok0B1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: Sel1	ECOD (1.6)
C	Sel1	e6ok0C1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: Sel1	ECOD (1.6)
D	Sel1	e6ok0D1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: Sel1	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	1.25.40.10	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat	Tetratricopeptide repeat domain	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF08238	Sel1 repeat (Sel1)	Sel1 repeat	-	Repeat
B	PF08238	Sel1 repeat (Sel1)	Sel1 repeat	-	Repeat
C	PF08238	Sel1 repeat (Sel1)	Sel1 repeat	-	Repeat
D	PF08238	Sel1 repeat (Sel1)	Sel1 repeat	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Sel1 repeat protein	beta-lactamase activity hydrolase activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides catalytic activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	-	-
B	Sel1 repeat protein	beta-lactamase activity hydrolase activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides catalytic activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	-	-
C	Sel1 repeat protein	beta-lactamase activity hydrolase activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides catalytic activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	-	-
D	Sel1 repeat protein	beta-lactamase activity hydrolase activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides catalytic activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
A	IPR006597	Sel1-like repeat	Repeat
A	IPR051726	Chitin Synthase Regulator	Family
B	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
B	IPR006597	Sel1-like repeat	Repeat
B	IPR051726	Chitin Synthase Regulator	Family
C	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
C	IPR006597	Sel1-like repeat	Repeat
C	IPR051726	Chitin Synthase Regulator	Family
D	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
D	IPR006597	Sel1-like repeat	Repeat
D	IPR051726	Chitin Synthase Regulator	Family

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A	MLY	Parent Component: LYS RESID: AA0075 PSI-MOD : N6,N6-dimethyl-L-lysine MOD:00084
A	MLZ	Parent Component: LYS RESID: AA0075 , AA0076 PSI-MOD : N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085
A	MSE	Parent Component: MET RESID: AA0075 , AA0076
B	MLY	Parent Component: LYS RESID: AA0075 , AA0076 , AA0075 PSI-MOD : N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085 , N6,N6-dimethyl-L-lysine MOD:00084
B	MSE	Parent Component: MET RESID: AA0075 , AA0076 , AA0075
C	MLY	Parent Component: LYS RESID: AA0075 , AA0076 , AA0075 , AA0075 PSI-MOD : N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085 , N6,N6-dimethyl-L-lysine MOD:00084 , N6,N6-dimethyl-L-lysine MOD:00084
C	MLZ	Parent Component: LYS RESID: AA0075 , AA0076 , AA0075 , AA0075 , AA0076 PSI-MOD : N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085 , N6,N6-dimethyl-L-lysine MOD:00084 , N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085
C	MSE	Parent Component: MET RESID: AA0075 , AA0076 , AA0075 , AA0075 , AA0076
D	MLY	Parent Component: LYS RESID: AA0075 , AA0076 , AA0075 , AA0075 , AA0076 , AA0075 PSI-MOD : N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085 , N6,N6-dimethyl-L-lysine MOD:00084 , N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085 , N6,N6-dimethyl-L-lysine MOD:00084
D	MLZ	Parent Component: LYS RESID: AA0075 , AA0076 , AA0075 , AA0075 , AA0076 , AA0075 , AA0076 PSI-MOD : N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085 , N6,N6-dimethyl-L-lysine MOD:00084 , N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085 , N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085
D	MSE	Parent Component: MET RESID: AA0075 , AA0076 , AA0075 , AA0075 , AA0076 , AA0075 , AA0076

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.