6RK0 | pdb_00006rk0

Structure of the Flavocytochrome Anf3 from Azotobacter vinelandii

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d6rk0b_	All beta proteins	Split barrel-like	FMN-binding split barrel	automated matches	automated matches	(Azotobacter vinelandii DJ ) [TaxId: 322710 ],	SCOPe (2.08)
A	d6rk0a_	All beta proteins	Split barrel-like	FMN-binding split barrel	automated matches	automated matches	(Azotobacter vinelandii DJ ) [TaxId: 322710 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2 Family	PNP-oxidase like	8097365	4002129	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	FMN-binding split barrel	8097366	3000856	SCOP2 (2022-06-29)
A	SCOP2B Superfamily	FMN-binding split barrel	8097366	3000856	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Pyridox_ox_2	e6rk0B1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: FMN-binding split barrel	F: Pyridox_ox_2	ECOD (1.6)
A	Pyridox_ox_2	e6rk0A1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: FMN-binding split barrel	F: Pyridox_ox_2	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF12900	Pyridoxamine 5'-phosphate oxidase (Pyridox_ox_2)	Pyridoxamine 5'-phosphate oxidase	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Uncharacterized protein	binding nucleoside phosphate binding nucleotide binding heterocyclic compound binding small molecule binding cation binding ion binding metal ion binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR012349	FMN-binding split barrel	Homologous Superfamily
A, B	IPR024747	Pyridoxamine 5'-phosphate oxidase-related	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.