Structure of Sheep Polyomavirus VP1 in complex with 6'-Sialyllactosamine
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| J | SCOP2B Superfamily | Group I dsDNA viruses | 8096172 | 3000939 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | Group I dsDNA viruses | 8096172 | 3000939 | SCOP2B (2022-06-29) |
| H | SCOP2B Superfamily | Group I dsDNA viruses | 8096172 | 3000939 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | Group I dsDNA viruses | 8096172 | 3000939 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | Group I dsDNA viruses | 8096172 | 3000939 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | Group I dsDNA viruses | 8096172 | 3000939 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Group I dsDNA viruses | 8096172 | 3000939 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Group I dsDNA viruses | 8096172 | 3000939 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Group I dsDNA viruses | 8096172 | 3000939 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Group I dsDNA viruses | 8096172 | 3000939 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| J | Polyoma_coat | e6y64J1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Polyoma_coat | ECOD (1.6) |
| I | Polyoma_coat | e6y64I1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Polyoma_coat | ECOD (1.6) |
| H | Polyoma_coat | e6y64H1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Polyoma_coat | ECOD (1.6) |
| G | Polyoma_coat | e6y64G1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Polyoma_coat | ECOD (1.6) |
| F | Polyoma_coat | e6y64F1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Polyoma_coat | ECOD (1.6) |
| E | Polyoma_coat | e6y64E1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Polyoma_coat | ECOD (1.6) |
| D | Polyoma_coat | e6y64D1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Polyoma_coat | ECOD (1.6) |
| C | Polyoma_coat | e6y64C1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Polyoma_coat | ECOD (1.6) |
| B | Polyoma_coat | e6y64B1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Polyoma_coat | ECOD (1.6) |
| A | Polyoma_coat | e6y64A1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Polyoma_coat | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| J | 2.60.175.10 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (utative) |
| I | 2.60.175.10 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (utative) |
| H | 2.60.175.10 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (utative) |
| G | 2.60.175.10 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (utative) |
| F | 2.60.175.10 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (utative) |
| E | 2.60.175.10 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (utative) |
| D | 2.60.175.10 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (utative) |
| C | 2.60.175.10 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (utative) |
| B | 2.60.175.10 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (utative) |
| A | 2.60.175.10 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (utative) |
