7A4A | pdb_00007a4a

Envelope glycprotein of endogenous retrovirus Y032 (Atlas virus) from the human hookworm Ancylostoma ceylanicum

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Phlebovirus_G2_2nd_1	e7a4aA2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Phlebovirus_G2_2nd_1	ECOD (1.6)
A	Phlebovirus_G2_1st	e7a4aA1	A: beta complex topology	X: Viral glycoprotein, central and dimerisation domains-like	H: Viral glycoprotein, central and dimerisation domains (From Topology)	T: Viral glycoprotein, central and dimerisation domains	F: Phlebovirus_G2_1st	ECOD (1.6)
B	Phlebovirus_G2_2nd_1	e7a4aB2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Phlebovirus_G2_2nd_1	ECOD (1.6)
B	Phlebovirus_G2_1st	e7a4aB1	A: beta complex topology	X: Viral glycoprotein, central and dimerisation domains-like	H: Viral glycoprotein, central and dimerisation domains (From Topology)	T: Viral glycoprotein, central and dimerisation domains	F: Phlebovirus_G2_1st	ECOD (1.6)
C	Phlebovirus_G2_2nd_1	e7a4aC2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Phlebovirus_G2_2nd_1	ECOD (1.6)
C	Phlebovirus_G2_1st	e7a4aC1	A: beta complex topology	X: Viral glycoprotein, central and dimerisation domains-like	H: Viral glycoprotein, central and dimerisation domains (From Topology)	T: Viral glycoprotein, central and dimerisation domains	F: Phlebovirus_G2_1st	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.40.3770	Mainly Beta	Sandwich	Immunoglobulin-like		CATH (utative)
B	2.60.40.3770	Mainly Beta	Sandwich	Immunoglobulin-like		CATH (utative)
C	2.60.40.3770	Mainly Beta	Sandwich	Immunoglobulin-like		CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C	PF07245	Phlebovirus glycoprotein G2 fusion domain (Phlebovirus_G2)	Phlebovirus glycoprotein G2 fusion domain	-	Family
A, B, C	PF19019	Phlebovirus glycoprotein G2 C-terminal domain (Phlebo_G2_C)	Phlebovirus glycoprotein G2 C-terminal domain	This family consists of several Phlebovirus glycoprotein G2 C-terminal Ig-like domains.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C	Integrase catalytic domain-containing protein	binding nucleic acid binding	nucleobase-containing compound metabolic process metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process DNA integration nucleic acid metabolic process	cellular anatomical structure membrane transferase complex, transferring phosphorus-containing groups protein-containing complex catalytic complex transferase complex DNA polymerase complex intracellular protein-containing complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C	IPR036397	Ribonuclease H superfamily	Homologous Superfamily
A, B, C	IPR040676	Domain of unknown function DUF5641	Domain
A, B, C	IPR001584	Integrase, catalytic core	Domain
A, B, C	IPR009878	Phlebovirus glycoprotein G2, fusion domain	Domain
A, B, C	IPR043502	DNA/RNA polymerase superfamily	Homologous Superfamily
A, B, C	IPR041588	Integrase zinc-binding domain	Domain
A, B, C	IPR043128	Reverse transcriptase/Diguanylate cyclase domain	Homologous Superfamily
A, B, C	IPR008737	Putative aspartic peptidase, DUF1758	Domain
A, B, C	IPR008042	Retrotransposon, Pao	Family
A, B, C	IPR043603	Phlebovirus glycoprotein G2, C-terminal domain	Domain
A, B, C	IPR005312	Protein of unknown function DUF1759	Family
A, B, C	IPR012337	Ribonuclease H-like superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.