7DF8 | pdb_00007df8

full length hNPC1L1-Apo


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APatchede7df8A4 A: alpha bundlesX: Multidrug efflux transporter AcrB transmembrane domain (From Topology)H: Multidrug efflux transporter AcrB transmembrane domain (From Topology)T: Multidrug efflux transporter AcrB transmembrane domainF: PatchedECOD (1.6)
ASterol-sensinge7df8A1 A: alpha bundlesX: Multidrug efflux transporter AcrB transmembrane domain (From Topology)H: Multidrug efflux transporter AcrB transmembrane domain (From Topology)T: Multidrug efflux transporter AcrB transmembrane domainF: Sterol-sensingECOD (1.6)
AF_UNCLASSIFIEDe7df8A3 A: a+b two layersX: Alpha-beta plaitsH: Ferredoxin domains in multidrug efflux transporterT: Multidrug efflux transporter AcrB pore domainF: F_UNCLASSIFIEDECOD (1.6)
A2A060601e7df8A2 A: a+b two layersX: Alpha-beta plaitsH: Ferredoxin domains in multidrug efflux transporterT: Multidrug efflux transporter AcrB pore domainF: 2A060601ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF02460Patched SSD (Patched)Patched SSDThe transmembrane protein Patched Swiss:P18502 is a receptor for the morphogenic Sonic Hedgehog. This protein associates with the smoothened protein (SMO) to transduce hedgehog signals. These proteins consist of twelve transmembrane segments and two ...The transmembrane protein Patched Swiss:P18502 is a receptor for the morphogenic Sonic Hedgehog. This protein associates with the smoothened protein (SMO) to transduce hedgehog signals. These proteins consist of twelve transmembrane segments and two extracellular domains (ECDs) [1,2]. This entry represents the Sterol-sensing domain (SSD) formed by some of the TM segments. This domain may play a role in the transport and/or regulation of the SMO ligand [2].
Domain
PF22314NPC1, middle luminal domain (NPC1_MLD)NPC1, middle luminal domainNPC intracellular cholesterol transporter 1 (NPC1) is a endosomal/lysosomal membrane protein that facilitates the trafficking of cholesterol and other cargo from lysosomes and is involved in cholesterol homeostasis. Mutations in the NPC1 gene cause t ...NPC intracellular cholesterol transporter 1 (NPC1) is a endosomal/lysosomal membrane protein that facilitates the trafficking of cholesterol and other cargo from lysosomes and is involved in cholesterol homeostasis. Mutations in the NPC1 gene cause the rare neurodegenerative disease Niemann-Pick Type C (NPC). This entry represents the middle luminal domain (MLD) of NPC1, which contains the Ebola glycoprotein interacting site [5].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
NPC1-like intracellular cholesterol transporter 1