7FDO | pdb_00007fdo

Crystal structure of transcription factor CPC in complex with EGL3

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BMyb_DNA-binding_2e7fdoB1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Myb_DNA-binding_2ECOD (1.6)
AbHLH-MYC_Ne7fdoA1 A: a+b three layersX: Profilin-likeH: sensor domains (From Topology)T: sensor domainsF: bHLH-MYC_NECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00249Myb-like DNA-binding domain (Myb_DNA-binding)Myb-like DNA-binding domainThis family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1]. Domain
PF14215bHLH-MYC and R2R3-MYB transcription factors N-terminal (bHLH-MYC_N)bHLH-MYC and R2R3-MYB transcription factors N-terminal- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Transcription factor CPC
Transcription factor EGL1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR009057Homedomain-like superfamilyHomologous Superfamily
IPR015495Myb transcription factor, plantsFamily
IPR001005SANT/Myb domainDomain
IPR017930Myb domainDomain
IPR054502Plant bHLH transcription factor, ACT-like domainDomain
IPR025610Transcription factor MYC/MYB N-terminalDomain
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainDomain
IPR036638Helix-loop-helix DNA-binding domain superfamilyHomologous Superfamily