7KDN | pdb_00007kdn

Crystal structure of Acetyl-CoA Synthetase in Complex with Adenosine-5'-propylphosphate from Aspergillus fumigatus


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BAMP-binding_3rd_1e7kdnB3 A: beta barrelsX: beta-barrel domain in acetyl-CoA synthetase-like proteins (From Topology)H: beta-barrel domain in acetyl-CoA synthetase-like proteins (From Topology)T: beta-barrel domain in acetyl-CoA synthetase-like proteinsF: AMP-binding_3rd_1ECOD (1.6)
BAMP-binding_Ce7kdnB4 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: a+b domain in acetyl-CoA synthetase-like proteins (From Topology)T: a+b domain in acetyl-CoA synthetase-like proteinsF: AMP-binding_CECOD (1.6)
BAMP-binding_1ste7kdnB1 A: a/b three-layered sandwichesX: Rossmann-like domain in Acetyl-CoA synthetase-like proteins (From Topology)H: Rossmann-like domain in Acetyl-CoA synthetase-like proteins (From Topology)T: Rossmann-like domain in Acetyl-CoA synthetase-like proteinsF: AMP-binding_1stECOD (1.6)
BAMP-binding_2nde7kdnB2 A: a/b three-layered sandwichesX: Rossmann-like domain in Acetyl-CoA synthetase-like proteins (From Topology)H: Rossmann-like domain in Acetyl-CoA synthetase-like proteins (From Topology)T: Rossmann-like domain in Acetyl-CoA synthetase-like proteinsF: AMP-binding_2ndECOD (1.6)
DAMP-binding_3rd_1e7kdnD4 A: beta barrelsX: beta-barrel domain in acetyl-CoA synthetase-like proteins (From Topology)H: beta-barrel domain in acetyl-CoA synthetase-like proteins (From Topology)T: beta-barrel domain in acetyl-CoA synthetase-like proteinsF: AMP-binding_3rd_1ECOD (1.6)
DAMP-binding_Ce7kdnD2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: a+b domain in acetyl-CoA synthetase-like proteins (From Topology)T: a+b domain in acetyl-CoA synthetase-like proteinsF: AMP-binding_CECOD (1.6)
DAMP-binding_1ste7kdnD1 A: a/b three-layered sandwichesX: Rossmann-like domain in Acetyl-CoA synthetase-like proteins (From Topology)H: Rossmann-like domain in Acetyl-CoA synthetase-like proteins (From Topology)T: Rossmann-like domain in Acetyl-CoA synthetase-like proteinsF: AMP-binding_1stECOD (1.6)
DAMP-binding_2nde7kdnD3 A: a/b three-layered sandwichesX: Rossmann-like domain in Acetyl-CoA synthetase-like proteins (From Topology)H: Rossmann-like domain in Acetyl-CoA synthetase-like proteins (From Topology)T: Rossmann-like domain in Acetyl-CoA synthetase-like proteinsF: AMP-binding_2ndECOD (1.6)
FAMP-binding_3rd_1e7kdnF2 A: beta barrelsX: beta-barrel domain in acetyl-CoA synthetase-like proteins (From Topology)H: beta-barrel domain in acetyl-CoA synthetase-like proteins (From Topology)T: beta-barrel domain in acetyl-CoA synthetase-like proteinsF: AMP-binding_3rd_1ECOD (1.6)
FAMP-binding_Ce7kdnF1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: a+b domain in acetyl-CoA synthetase-like proteins (From Topology)T: a+b domain in acetyl-CoA synthetase-like proteinsF: AMP-binding_CECOD (1.6)
FAMP-binding_1ste7kdnF4 A: a/b three-layered sandwichesX: Rossmann-like domain in Acetyl-CoA synthetase-like proteins (From Topology)H: Rossmann-like domain in Acetyl-CoA synthetase-like proteins (From Topology)T: Rossmann-like domain in Acetyl-CoA synthetase-like proteinsF: AMP-binding_1stECOD (1.6)
FAMP-binding_2nde7kdnF3 A: a/b three-layered sandwichesX: Rossmann-like domain in Acetyl-CoA synthetase-like proteins (From Topology)H: Rossmann-like domain in Acetyl-CoA synthetase-like proteins (From Topology)T: Rossmann-like domain in Acetyl-CoA synthetase-like proteinsF: AMP-binding_2ndECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.40.50.12780 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold ANL, N-terminal domainCATH (utative)
C3.40.50.12780 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold ANL, N-terminal domainCATH (utative)
E3.40.50.12780 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold ANL, N-terminal domainCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF00501AMP-binding enzyme (AMP-binding)AMP-binding enzyme- Family
A, B, C, D, E
PF13193AMP-binding enzyme C-terminal domain (AMP-binding_C)AMP-binding enzyme C-terminal domainThis is a small domain that is found C terminal to Pfam:PF00501. It has a central beta sheet core that is flanked by alpha helices. Domain
A, B, C, D, E
PF16177Acetyl-coenzyme A synthetase N-terminus (ACAS_N)Acetyl-coenzyme A synthetase N-terminus- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Acetyl-coenzyme A synthetase

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR011904Acetate-CoA ligaseFamily
A, B, C, D, E
IPR020845AMP-binding, conserved siteConserved Site
A, B, C, D, E
IPR045851AMP-binding enzyme, C-terminal domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR042099ANL, N-terminal domainHomologous Superfamily
A, B, C, D, E
IPR025110AMP-binding enzyme, C-terminal domainDomain
A, B, C, D, E
IPR000873AMP-dependent synthetase/ligase domainDomain
A, B, C, D, E
IPR032387Acetyl-coenzyme A synthetase, N-terminal domainDomain