Crystal structure of human TMPRSS2 in complex with Nafamostat
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Trypsin_1 | e7meqA1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin_1 | ECOD (1.6) |
| A | SRCR | e7meqA2 | A: a+b complex topology | X: SRCR-like | H: SRCR-like (From Topology) | T: SRCR-like | F: SRCR | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF15494 | Scavenger receptor cysteine-rich domain (SRCR_2) | Scavenger receptor cysteine-rich domain | SRCR_2 is a scavenger receptor cysteine-rich domain family found largely on vertebrate sequences up-stream of the trypsin-like transmembrane serine protease, Spinesin. | Domain | |
| PF00089 | Trypsin (Trypsin) | Trypsin | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR002172 | Low-density lipoprotein (LDL) receptor class A repeat | Repeat | |
| IPR009003 | Peptidase S1, PA clan | Homologous Superfamily | |
| IPR001190 | SRCR domain | Domain | |
| IPR001314 | Peptidase S1A, chymotrypsin family | Family | |
| IPR033116 | Serine proteases, trypsin family, serine active site | Active Site | |
| IPR036772 | SRCR-like domain superfamily | Homologous Superfamily | |
| IPR001254 | Serine proteases, trypsin domain | Domain | |
| IPR023415 | Low-density lipoprotein (LDL) receptor class A, conserved site | Conserved Site | |
| IPR036055 | LDL receptor-like superfamily | Homologous Superfamily | |
| IPR043504 | Peptidase S1, PA clan, chymotrypsin-like fold | Homologous Superfamily | |
| IPR018114 | Serine proteases, trypsin family, histidine active site | Active Site |














