Complex of Bet v 1 with the Fab fragments of a three antibody cocktail
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | V-set_8 | e7mxlA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_8 | ECOD (1.6) |
| A | C1-set_1 | e7mxlA2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_1 | ECOD (1.6) |
| B | C1-set_4 | e7mxlB2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_4 | ECOD (1.6) |
| B | V-set | e7mxlB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set | ECOD (1.6) |
| C | Polyketide_cyc2 | e7mxlC1 | A: a+b two layers | X: TBP-like | H: Bet v1-like (From Topology) | T: Bet v1-like | F: Polyketide_cyc2 | ECOD (1.6) |
| D [auth J] | V-set_8 | e7mxlJ1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_8 | ECOD (1.6) |
| D [auth J] | C1-set_1 | e7mxlJ2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_1 | ECOD (1.6) |
| E [auth K] | C1-set_4 | e7mxlK2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_4 | ECOD (1.6) |
| E [auth K] | V-set | e7mxlK1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set | ECOD (1.6) |
| F [auth L] | C1-set_4 | e7mxlL2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_4 | ECOD (1.6) |
| F [auth L] | V-set | e7mxlL1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set | ECOD (1.6) |
| G [auth H] | C1-set_1 | e7mxlH2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_1 | ECOD (1.6) |
| G [auth H] | V-set_12 | e7mxlH1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_12 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| B | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| D [auth J] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| E [auth K] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| F [auth L] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| G [auth H] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
SAbDab Antibody Annotation SAbDab Database Homepage
| Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
|---|---|---|---|---|---|
| Heavy Chain | IGHV4 | - | major pollen allergen bet v 1-a | SAbDab (2025-11-07) | |
| Light Chain | IGKV3 | Kappa | major pollen allergen bet v 1-a | SAbDab (2025-11-07) | |
| D [auth J] | Heavy Chain | IGHV1 | - | major pollen allergen bet v 1-a | SAbDab (2025-11-07) |
| E [auth K] | Light Chain | IGKV3 | Kappa | major pollen allergen bet v 1-a | SAbDab (2025-11-07) |
| F [auth L] | Light Chain | IGKV3 | Kappa | major pollen allergen bet v 1-a | SAbDab (2025-11-07) |
| G [auth H] | Heavy Chain | IGHV3 | - | major pollen allergen bet v 1-a | SAbDab (2025-11-07) |
Thera-SAbDab Antibody Annotation Thera-SAbDab Database Homepage
| Chain | Name | Target | Provenance Source |
|---|---|---|---|
| Bremzalerbart | Bet v 1 | Therapeutic SAbDab (2025-11-07) | |
| Bremzalerbart | Bet v 1 | Therapeutic SAbDab (2025-11-07) | |
| D [auth J] | Atisnolerbart | Bet v 1 | Therapeutic SAbDab (2025-11-07) |
| E [auth K] | Atisnolerbart | Bet v 1 | Therapeutic SAbDab (2025-11-07) |
| F [auth L] | Umesolerbart | Bet v 1 | Therapeutic SAbDab (2025-11-07) |
| G [auth H] | Umesolerbart | Bet v 1 | Therapeutic SAbDab (2025-11-07) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR024949 | Bet v I type allergen | Family | |
| IPR000916 | Bet v I/Major latex protein | Domain | |
| IPR050279 | Plant defense and hormone signaling protein | Family | |
| IPR023393 | START-like domain superfamily | Homologous Superfamily |














