7NHK | pdb_00007nhk

LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
H [auth 8]SCOP2B SuperfamilyRibosomal protein L36 8096456 3001346 SCOP2B (2022-06-29)
G [auth 7]SCOP2B SuperfamilyL35p-like 8096472 3000790 SCOP2B (2022-06-29)
ZA [auth F]SCOP2 FamilyRibosomal protein L1p/L10e-like 8103043 4002929 SCOP2 (2022-06-29)
ZA [auth F]SCOP2 SuperfamilyRibosomal protein L1p/L10e-like 8103044 3001911 SCOP2 (2022-06-29)
E [auth 5]SCOP2B SuperfamilyZn-binding ribosomal proteins 8096488 3001320 SCOP2B (2022-06-29)
VA [auth t]SCOP2B SuperfamilyRibosomal protein S19 8096436 3000686 SCOP2B (2022-06-29)
TA [auth r]SCOP2B SuperfamilyNucleic acid-binding proteins 8096442 3000135 SCOP2B (2022-06-29)
SA [auth q]SCOP2B SuperfamilyRibosomal protein S16 8096484 3000680 SCOP2B (2022-06-29)
RA [auth p]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8096492 3001284 SCOP2B (2022-06-29)
QA [auth o]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8096448 3000068 SCOP2B (2022-06-29)
PA [auth n]SCOP2B SuperfamilyS13-like H2TH domain 8096454 3000053 SCOP2B (2022-06-29)
OA [auth m]SCOP2B SuperfamilyNucleic acid-binding proteins 8096428 3000135 SCOP2B (2022-06-29)
NA [auth l]SCOP2B SuperfamilyTranslational machinery components 8096464 3000571 SCOP2B (2022-06-29)
D [auth 4]SCOP2B SuperfamilyZn-binding ribosomal proteins 8096480 3001320 SCOP2B (2022-06-29)
MA [auth k]SCOP2B SuperfamilyRibosomal protein S10 8096432 3001336 SCOP2B (2022-06-29)
LA [auth j]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8096496 3000100 SCOP2B (2022-06-29)
KA [auth i]SCOP2B SuperfamilyRibosomal protein S8 8096444 3000709 SCOP2B (2022-06-29)
JA [auth h]SCOP2B SuperfamilyRibosomal protein S7 8096426 3000799 SCOP2B (2022-06-29)
IA [auth g]SCOP2B SuperfamilyRibosomal protein S6 8096424 3001323 SCOP2B (2022-06-29)
GA [auth e]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8096490 3001473 SCOP2B (2022-06-29)
EA [auth c]SCOP2 FamilyRibosomal protein S2-like 8103041 4003744 SCOP2 (2022-06-29)
EA [auth c]SCOP2 SuperfamilySIS domain/Ribosomal protein S2-like 8103042 3001397 SCOP2 (2022-06-29)
C [auth 2]SCOP2B SuperfamilyRibosomal protein L30p/L7e 8096468 3001378 SCOP2B (2022-06-29)
CA [auth Z]SCOP2B SuperfamilyL28p-like 8096494 3001966 SCOP2B (2022-06-29)
BA [auth Y]SCOP2B SuperfamilyRibosomal L27 protein-like 8096476 3000539 SCOP2B (2022-06-29)
AA [auth X]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8096466 3000334 SCOP2B (2022-06-29)
Z [auth W]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8096434 3000210 SCOP2B (2022-06-29)
Y [auth V]SCOP2B SuperfamilyRibosomal protein L22 8096452 3001078 SCOP2B (2022-06-29)
X [auth U]SCOP2B Superfamilyl21p-like 8096478 3002005 SCOP2B (2022-06-29)
W [auth T]SCOP2B SuperfamilyRibosomal protein L20 8096474 3000563 SCOP2B (2022-06-29)
V [auth S]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8096486 3000334 SCOP2B (2022-06-29)
U [auth R]SCOP2B SuperfamilyTranslational machinery components 8096446 3000571 SCOP2B (2022-06-29)
T [auth Q]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8096470 3000995 SCOP2B (2022-06-29)
B [auth 1]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8096462 3000713 SCOP2B (2022-06-29)
S [auth P]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8096458 3000884 SCOP2B (2022-06-29)
R [auth O]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8096450 3001045 SCOP2B (2022-06-29)
Q [auth N]SCOP2B Superfamily50S Ribosomal protein L14-like 8096438 3000433 SCOP2B (2022-06-29)
P [auth M]SCOP2B SuperfamilyRibosomal protein L13 8096498 3001134 SCOP2B (2022-06-29)
N [auth J]SCOP2B SuperfamilyRL5-like 8096440 3001709 SCOP2B (2022-06-29)
M [auth I]SCOP2 FamilyRibosomal protein L4 8103063 4003628 SCOP2 (2022-06-29)
M [auth I]SCOP2 SuperfamilyRibosomal protein L4 8103064 3001146 SCOP2 (2022-06-29)
L [auth H]SCOP2B SuperfamilyTranslational proteins 8096430 3000811 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
H [auth 8]Ribosomal_L36e7nhk81 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: Ribosomal_L36ECOD (1.6)
G [auth 7]Ribosomal_L35pe7nhk71 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
F [auth 6]Ribosomal_L34e7nhk61 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
AB [auth 3]Ribosomal_L31e7nhk31 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
ZA [auth F]Ribosomal_L1_2nd_1e7nhkF1 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: Ribosomal_L1_2nd_1ECOD (1.6)
E [auth 5]Ribosomal_L33e7nhk51 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
WA [auth u]Ribosomal_S20pe7nhku1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
VA [auth t]Ribosomal_S19e7nhkt1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
UA [auth s]Ribosomal_S18e7nhks1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
TA [auth r]Ribosomal_S17_1e7nhkr1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
SA [auth q]Ribosomal_S16_1e7nhkq1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16_1ECOD (1.6)
RA [auth p]Ribosomal_S15_1e7nhkp1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
QA [auth o]Ribosomal_S14e7nhko1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
PA [auth n]Ribosomal_S13_1e7nhkn1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
OA [auth m]Ribosom_S12_S23e7nhkm1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
NA [auth l]Ribosomal_S11e7nhkl1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
D [auth 4]Ribosomal_L32pe7nhk41 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
MA [auth k]Ribosomal_S10e7nhkk1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
LA [auth j]Ribosomal_S9e7nhkj1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
KA [auth i]Ribosomal_S8_Ne7nhki2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
KA [auth i]Ribosomal_S8_Ce7nhki1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
JA [auth h]Ribosomal_S7_1e7nhkh1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
IA [auth g]Ribosomal_S6e7nhkg1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
HA [auth f]Ribosomal_S5_Ce7nhkf2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
HA [auth f]Ribosomal_S5e7nhkf1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
GA [auth e]S4e7nhke1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
FA [auth d]Ribosomal_S3_Ce7nhkd1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
FA [auth d]KH_2_1e7nhkd2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
EA [auth c]Ribosomal_S2e7nhkc1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
C [auth 2]Ribosomal_L30e7nhk21 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
CA [auth Z]Ribosomal_L28e7nhkZ1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
BA [auth Y]Ribosomal_L27e7nhkY1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
AA [auth X]ribosomal_L24_1e7nhkX1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24_1ECOD (1.6)
Z [auth W]Ribosomal_L23_2e7nhkW1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
Y [auth V]Ribosomal_L22e7nhkV1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
X [auth U]Ribosomal_L21pe7nhkU1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
W [auth T]Ribosomal_L20e7nhkT1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
V [auth S]Ribosomal_L19e7nhkS1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
U [auth R]Ribosomal_L18pe7nhkR1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
T [auth Q]Ribosomal_L17_1e7nhkQ1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
B [auth 1]Ribosomal_L29e7nhk11 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
S [auth P]Ribosomal_L16e7nhkP1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
R [auth O]Ribosomal_L27Ae7nhkO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
Q [auth N]Ribosomal_L14e7nhkN1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
P [auth M]Ribosomal_L13e7nhkM1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
O [auth K]Ribosomal_L6e7nhkK2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
O [auth K]Ribosomal_L6_1e7nhkK1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
N [auth J]Ribosomal_L5_Ce7nhkJ1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
M [auth I]Ribosomal_L4e7nhkI1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
L [auth H]Ribosomal_L3e7nhkH1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
K [auth G]Ribosomal_L2_1e7nhkG2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
K [auth G]Ribosomal_L2_Ce7nhkG1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
A [auth 0]ABC_trane7nhk01 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: ABC_tranECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
H [auth 8]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36Domain
G [auth 7]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
F [auth 6]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
AB [auth 3]PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
ZA [auth F]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
ZA [auth F]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
XA [auth D]PF07650KH domain (KH_2)KH domainDomain
E [auth 5]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
D [auth 4]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
C [auth 2]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
CA [auth Z]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
AA [auth X]PF17136Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24)Large ribosomal subunit protein uL24, C-terminal domainThis entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ...This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 makes very minor contributions to the biogenesis structure, and function of 60s ribosomal subunits [1]. However, RPL24 is essential to generate the first intermediate during 50s ribosomal subunits assembly [2]. RPL26 have an extra-ribosomal function to enhances p53 translation after DNA damage [3].
Domain
AA [auth X]PF00467KOW motif (KOW)KOW motif- Family
Z [auth W]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
Y [auth V]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
X [auth U]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
W [auth T]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
W [auth T]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
V [auth S]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
V [auth S]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
U [auth R]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
U [auth R]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
T [auth Q]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
T [auth Q]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
B [auth 1]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
S [auth P]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
S [auth P]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
R [auth O]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
R [auth O]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
Q [auth N]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
Q [auth N]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
P [auth M]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
P [auth M]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
O [auth K]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
N [auth J]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
N [auth J]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
N [auth J]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
M [auth I]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
L [auth H]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
K [auth G]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
K [auth G]PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
K [auth G]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth A]23S rRNA---
H [auth 8]50S ribosomal protein L36
G [auth 7]50S ribosomal protein L35
F [auth 6]50S ribosomal protein L34
AB [auth 3]50S ribosomal protein L31 type B
ZA [auth F]50S ribosomal protein L1
YA [auth b]RNA (5'-R(P*GP*GP*AP*GP*GP*UP*AP*UP*GP*AP*CP*AP*A)-3')---
XA [auth D]tRNA-fMETi---
E [auth 5]50S ribosomal protein L33
WA [auth u]30S ribosomal protein S20
VA [auth t]30S ribosomal protein S19
UA [auth s]30S ribosomal protein S18
TA [auth r]30S ribosomal protein S17
SA [auth q]30S ribosomal protein S16
RA [auth p]30S ribosomal protein S15
QA [auth o]30S ribosomal protein S14 type Z
PA [auth n]30S ribosomal protein S13
OA [auth m]30S ribosomal protein S12
NA [auth l]30S ribosomal protein S11
D [auth 4]50S ribosomal protein L32
MA [auth k]30S ribosomal protein S10
LA [auth j]30S ribosomal protein S9
KA [auth i]30S ribosomal protein S8
JA [auth h]30S ribosomal protein S7
IA [auth g]30S ribosomal protein S6
HA [auth f]30S ribosomal protein S5
GA [auth e]30S ribosomal protein S4
FA [auth d]30S ribosomal protein S3
EA [auth c]30S ribosomal protein S2
DA [auth a]16S rRNA---
C [auth 2]50S ribosomal protein L30
CA [auth Z]50S ribosomal protein L28
BA [auth Y]50S ribosomal protein L27
AA [auth X]50S ribosomal protein L24
Z [auth W]50S ribosomal protein L23
Y [auth V]50S ribosomal protein L22
X [auth U]50S ribosomal protein L21
W [auth T]50S ribosomal protein L20
V [auth S]50S ribosomal protein L19
U [auth R]50S ribosomal protein L18
T [auth Q]50S ribosomal protein L17
B [auth 1]50S ribosomal protein L29
S [auth P]50S ribosomal protein L16
R [auth O]50S ribosomal protein L15
Q [auth N]50S ribosomal protein L14
P [auth M]50S ribosomal protein L13
O [auth K]50S ribosomal protein L6---
N [auth J]50S ribosomal protein L5
M [auth I]50S ribosomal protein L4---
L [auth H]50S ribosomal protein L3
K [auth G]50S ribosomal protein L2
J [auth B]5S rRNA---
A [auth 0]ABC-F type ribosomal protection protein Lsa(A)---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
H [auth 8]IPR000473Large ribosomal subunit protein bL36Family
H [auth 8]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
G [auth 7]IPR021137Large ribosomal subunit protein bL35-likeFamily
G [auth 7]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
G [auth 7]IPR001706Large ribosomal subunit protein bL35Family
G [auth 7]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
F [auth 6]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
F [auth 6]IPR000271Large ribosomal subunit protein bL34Family
AB [auth 3]IPR002150Large ribosomal subunit protein bL31 type A/BFamily
AB [auth 3]IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
AB [auth 3]IPR027493Large ribosomal subunit protein bL31 type BFamily
AB [auth 3]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
ZA [auth F]IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
ZA [auth F]IPR005878Large ribosomal subunit protein uL1, bacteriaFamily
ZA [auth F]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
ZA [auth F]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
ZA [auth F]IPR002143Large ribosomal subunit protein uL1Family
ZA [auth F]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
E [auth 5]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
E [auth 5]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
E [auth 5]IPR001705Large ribosomal subunit protein bL33Family
E [auth 5]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
WA [auth u]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
WA [auth u]IPR002583Small ribosomal subunit protein bS20Family
VA [auth t]IPR005732Small ribosomal subunit protein uS19, bacteriaFamily
VA [auth t]IPR002222Small ribosomal subunit protein uS19Family
VA [auth t]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
VA [auth t]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
UA [auth s]IPR001648Small ribosomal subunit protein bS18Family
UA [auth s]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
UA [auth s]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
TA [auth r]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
TA [auth r]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
TA [auth r]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
TA [auth r]IPR000266Small ribosomal subunit protein uS17Family
SA [auth q]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
SA [auth q]IPR000307Small ribosomal subunit protein bS16Family
RA [auth p]IPR005290Small ribosomal subunit protein uS15, bacteriaFamily
RA [auth p]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
RA [auth p]IPR000589Small ribosomal subunit protein uS15Family
QA [auth o]IPR023053Small ribosomal subunit protein uS14, bacteriaFamily
QA [auth o]IPR001209Small ribosomal subunit protein uS14Family
QA [auth o]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
QA [auth o]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
PA [auth n]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
PA [auth n]IPR001892Small ribosomal subunit protein uS13Family
PA [auth n]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
PA [auth n]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
PA [auth n]IPR019980Small ribosomal subunit protein uS13, bacteriaFamily
OA [auth m]IPR006032Small ribosomal subunit protein uS12Family
OA [auth m]IPR005679Ribosomal protein uS12, bacteriaFamily
OA [auth m]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
NA [auth l]IPR001971Small ribosomal subunit protein uS11Family
NA [auth l]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
NA [auth l]IPR019981Small ribosomal subunit protein uS11, bacteriaFamily
NA [auth l]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
D [auth 4]IPR002677Large ribosomal subunit protein bL32Family
D [auth 4]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
D [auth 4]IPR044957Large ribosomal subunit protein bL32, bacteriaFamily
MA [auth k]IPR001848Small ribosomal subunit protein uS10Family
MA [auth k]IPR027486Small ribosomal subunit protein uS10 domainDomain
MA [auth k]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
MA [auth k]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
LA [auth j]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
LA [auth j]IPR023035Small ribosomal subunit protein uS9, bacteria/plastidFamily
LA [auth j]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
LA [auth j]IPR000754Small ribosomal subunit protein uS9Family
LA [auth j]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
KA [auth i]IPR000630Small ribosomal subunit protein uS8Family
KA [auth i]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
KA [auth i]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
JA [auth h]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
JA [auth h]IPR000235Small ribosomal subunit protein uS7Family
JA [auth h]IPR005717Small ribosomal subunit protein uS7, bacteria/organellaFamily
JA [auth h]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
JA [auth h]IPR023798Small ribosomal subunit protein uS7 domainDomain
IA [auth g]IPR000529Small ribosomal subunit protein bS6Family
IA [auth g]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
IA [auth g]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
IA [auth g]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
HA [auth f]IPR000851Small ribosomal subunit protein uS5Family
HA [auth f]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
HA [auth f]IPR005712Small ribosomal subunit protein uS5, bacteriaFamily
HA [auth f]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
HA [auth f]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
HA [auth f]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
HA [auth f]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
GA [auth e]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
GA [auth e]IPR002942RNA-binding S4 domainDomain
GA [auth e]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
GA [auth e]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
GA [auth e]IPR022801Small ribosomal subunit protein uS4Family
GA [auth e]IPR005709Small ribosomal subunit protein uS4, bacteriaFamily
FA [auth d]IPR005704Small ribosomal subunit protein uS3, bacteriaFamily
FA [auth d]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
FA [auth d]IPR057258Small ribosomal subunit protein uS3Family
FA [auth d]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
FA [auth d]IPR004087K Homology domainDomain
FA [auth d]IPR004044K Homology domain, type 2Domain
FA [auth d]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
FA [auth d]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
FA [auth d]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
EA [auth c]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
EA [auth c]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
EA [auth c]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
EA [auth c]IPR001865Small ribosomal subunit protein uS2Family
C [auth 2]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
C [auth 2]IPR005996Large ribosomal subunit protein uL30, bacteriaFamily
C [auth 2]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
C [auth 2]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
CA [auth Z]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
CA [auth Z]IPR050096Bacterial ribosomal protein bL28Family
CA [auth Z]IPR001383Large ribosomal subunit protein bL28, bacteriaFamily
CA [auth Z]IPR026569Large ribosomal subunit protein bL28Family
CA [auth Z]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
BA [auth Y]IPR001684Large ribosomal subunit protein bL27Family
BA [auth Y]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
AA [auth X]IPR057264Large ribosomal subunit protein uL24, C-terminal domainDomain
AA [auth X]IPR003256Large ribosomal subunit protein uL24Family
AA [auth X]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
AA [auth X]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
AA [auth X]IPR005824KOWDomain
AA [auth X]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
AA [auth X]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
Z [auth W]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
Z [auth W]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
Z [auth W]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
Z [auth W]IPR013025Large ribosomal subunit protein uL23-likeFamily
Y [auth V]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
Y [auth V]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
Y [auth V]IPR001063Large ribosomal subunit protein uL22Family
Y [auth V]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
Y [auth V]IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily
X [auth U]IPR028909Large ribosomal subunit protein bL21-likeFamily
X [auth U]IPR001787Large ribosomal subunit protein bL21Family
X [auth U]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
W [auth T]IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
W [auth T]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
W [auth T]IPR005813Large ribosomal subunit protein bL20Family
V [auth S]IPR001857Large ribosomal subunit protein bL19Family
V [auth S]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
V [auth S]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
V [auth S]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
U [auth R]IPR005484Large ribosomal subunit protein uL18, bacterial/plantae/animaliaFamily
U [auth R]IPR057268Large ribosomal subunit protein uL18Family
U [auth R]IPR004389Large ribosomal subunit protein uL18, bacteriaFamily
T [auth Q]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
T [auth Q]IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
T [auth Q]IPR000456Large ribosomal subunit protein bL17Family
B [auth 1]IPR050063Universal ribosomal protein uL29Family
B [auth 1]IPR001854Large ribosomal subunit protein uL29Family
B [auth 1]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
B [auth 1]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
S [auth P]IPR000114Large ribosomal subunit protein uL16, bacteriaFamily
S [auth P]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
S [auth P]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
S [auth P]IPR016180Large ribosomal subunit protein uL16 domainDomain
S [auth P]IPR047873Large ribosomal subunit protein uL16Family
R [auth O]IPR021131Large ribosomal subunit protein uL15/eL18Domain
R [auth O]IPR030878Large ribosomal subunit protein uL15Family
R [auth O]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
R [auth O]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
R [auth O]IPR005749Large ribosomal subunit protein uL15, bacteriaFamily
Q [auth N]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
Q [auth N]IPR000218Large ribosomal subunit protein uL14Family
Q [auth N]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
Q [auth N]IPR005745Large ribosomal subunit protein uL14, bacteriaFamily
P [auth M]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
P [auth M]IPR005822Large ribosomal subunit protein uL13Family
P [auth M]IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
P [auth M]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
N [auth J]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
N [auth J]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
N [auth J]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
N [auth J]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
N [auth J]IPR002132Large ribosomal subunit protein uL5Family
N [auth J]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
L [auth H]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
L [auth H]IPR019927Large ribosomal subunit protein uL3, bacteria/organellaFamily
L [auth H]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
L [auth H]IPR000597Large ribosomal subunit protein uL3Family
K [auth G]IPR005880Large ribosomal subunit protein uL2, bacteria/organellaFamily
K [auth G]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
K [auth G]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
K [auth G]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
K [auth G]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
K [auth G]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
K [auth G]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
K [auth G]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
K [auth G]IPR002171Large ribosomal subunit protein uL2Family