7NHM | pdb_00007nhm

70S ribosome from Staphylococcus aureus


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
H [auth I]SCOP2B SuperfamilyRibosomal protein L4 8094174 3001146 SCOP2B (2022-06-29)
G [auth H]SCOP2B SuperfamilyTranslational proteins 8089152 3000811 SCOP2B (2022-06-29)
XA [auth c]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8099284 3001397 SCOP2B (2022-06-29)
WA [auth r]SCOP2B SuperfamilyNucleic acid-binding proteins 8059272 3000135 SCOP2B (2022-06-29)
VA [auth m]SCOP2B SuperfamilyNucleic acid-binding proteins 8098336 3000135 SCOP2B (2022-06-29)
TA [auth g]SCOP2B SuperfamilyRibosomal protein S6 8066489 3001323 SCOP2B (2022-06-29)
RA [auth i]SCOP2B SuperfamilyRibosomal protein S8 8079049 3000709 SCOP2B (2022-06-29)
PA [auth j]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8082669 3000100 SCOP2B (2022-06-29)
OA [auth n]SCOP2B SuperfamilyS13-like H2TH domain 8099266 3000053 SCOP2B (2022-06-29)
NA [auth t]SCOP2B SuperfamilyRibosomal protein S19 8086064 3000686 SCOP2B (2022-06-29)
MA [auth 9]SCOP2B SuperfamilyRibosomal protein L36 8083312 3001346 SCOP2B (2022-06-29)
KA [auth q]SCOP2B SuperfamilyRibosomal protein S16 8066555 3000680 SCOP2B (2022-06-29)
JA [auth p]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8072621 3001284 SCOP2B (2022-06-29)
HA [auth l]SCOP2B SuperfamilyTranslational machinery components 8099268 3000571 SCOP2B (2022-06-29)
GA [auth k]SCOP2 FamilyRibosomal protein S10 8103029 4001240 SCOP2 (2022-06-29)
GA [auth k]SCOP2 SuperfamilyRibosomal protein S10 8103030 3001336 SCOP2 (2022-06-29)
FA [auth h]SCOP2B SuperfamilyRibosomal protein S7 8066031 3000799 SCOP2B (2022-06-29)
EA [auth e]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8083392 3001473 SCOP2B (2022-06-29)
BA [auth 8]SCOP2B SuperfamilyL35p-like 8083334 3000790 SCOP2B (2022-06-29)
AA [auth 6]SCOP2B SuperfamilyZn-binding ribosomal proteins 8075068 3001320 SCOP2B (2022-06-29)
Z [auth 5]SCOP2B SuperfamilyZn-binding ribosomal proteins 8081583 3001320 SCOP2B (2022-06-29)
Y [auth 3]SCOP2B SuperfamilyRibosomal protein L30p/L7e 8076281 3001378 SCOP2B (2022-06-29)
X [auth 2]SCOP2 FamilyRibosomal protein L29 (L29p) 8103139 4000600 SCOP2 (2022-06-29)
X [auth 2]SCOP2 SuperfamilyRibosomal protein L29 (L29p) 8103140 3000713 SCOP2 (2022-06-29)
U [auth X]SCOP2 FamilyRibosomal proteins L24p and L21e 8103127 4001752 SCOP2 (2022-06-29)
U [auth X]SCOP2 SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8103128 3000334 SCOP2 (2022-06-29)
T [auth W]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8086046 3000210 SCOP2B (2022-06-29)
B [auth P]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8076041 3000884 SCOP2B (2022-06-29)
S [auth V]SCOP2B SuperfamilyRibosomal protein L22 8076726 3001078 SCOP2B (2022-06-29)
R [auth U]SCOP2B Superfamilyl21p-like 8094148 3002005 SCOP2B (2022-06-29)
Q [auth T]SCOP2B SuperfamilyRibosomal protein L20 8094941 3000563 SCOP2B (2022-06-29)
P [auth S]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8082423 3000334 SCOP2B (2022-06-29)
N [auth Q]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8089022 3000995 SCOP2B (2022-06-29)
M [auth O]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8070555 3001045 SCOP2B (2022-06-29)
L [auth N]SCOP2B Superfamily50S Ribosomal protein L14-like 8093892 3000433 SCOP2B (2022-06-29)
K [auth M]SCOP2B SuperfamilyRibosomal protein L13 8066059 3001134 SCOP2B (2022-06-29)
A [auth Z]SCOP2B SuperfamilyRibosomal L27 protein-like 8075030 3000539 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
I [auth J]Ribosomal_L5_Ce7nhmJ1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
H [auth I]Ribosomal_L4e7nhmI1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
G [auth H]Ribosomal_L3e7nhmH1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
F [auth G]Ribosomal_L2_1e7nhmG2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
F [auth G]Ribosomal_L2_Ce7nhmG1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
ZA [auth 4]Ribosomal_L31e7nhm41 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
XA [auth c]Ribosomal_S2e7nhmc1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
WA [auth r]Ribosomal_S17_1e7nhmr1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
VA [auth m]Ribosom_S12_S23e7nhmm1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
TA [auth g]Ribosomal_S6e7nhmg1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
SA [auth s]Ribosomal_S18e7nhms1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
RA [auth i]Ribosomal_S8_Ne7nhmi2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
RA [auth i]Ribosomal_S8_Ce7nhmi1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
QA [auth f]Ribosomal_S5_Ce7nhmf2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
QA [auth f]Ribosomal_S5e7nhmf1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
PA [auth j]Ribosomal_S9e7nhmj1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
OA [auth n]Ribosomal_S13_1e7nhmn1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
NA [auth t]Ribosomal_S19e7nhmt1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
MA [auth 9]Ribosomal_L36e7nhm91 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: Ribosomal_L36ECOD (1.6)
LA [auth u]Ribosomal_S20pe7nhmu1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
KA [auth q]Ribosomal_S16_1e7nhmq1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16_1ECOD (1.6)
JA [auth p]Ribosomal_S15_1e7nhmp1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
IA [auth o]Ribosomal_S14e7nhmo1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
HA [auth l]Ribosomal_S11e7nhml1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
GA [auth k]Ribosomal_S10e7nhmk1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
FA [auth h]Ribosomal_S7_1e7nhmh1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
EA [auth e]S4e7nhme1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
DA [auth d]Ribosomal_S3_Ce7nhmd1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
DA [auth d]KH_2_1e7nhmd2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
CA [auth 7]Ribosomal_L34e7nhm71 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
BA [auth 8]Ribosomal_L35pe7nhm81 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
AA [auth 6]Ribosomal_L33e7nhm61 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
Z [auth 5]Ribosomal_L32pe7nhm51 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
Y [auth 3]Ribosomal_L30e7nhm31 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
X [auth 2]Ribosomal_L29e7nhm21 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
W [auth 1]Ribosomal_L28e7nhm11 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
V [auth Y]Ribosomal_L25pe7nhmY1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
U [auth X]ribosomal_L24_1e7nhmX1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24_1ECOD (1.6)
T [auth W]Ribosomal_L23_2e7nhmW1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
B [auth P]Ribosomal_L16e7nhmP1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
S [auth V]Ribosomal_L22e7nhmV1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
R [auth U]Ribosomal_L21pe7nhmU1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
Q [auth T]Ribosomal_L20e7nhmT1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
P [auth S]Ribosomal_L19e7nhmS1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
O [auth R]Ribosomal_L18pe7nhmR1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
N [auth Q]Ribosomal_L17_1e7nhmQ1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
M [auth O]Ribosomal_L27Ae7nhmO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
L [auth N]Ribosomal_L14e7nhmN1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
K [auth M]Ribosomal_L13e7nhmM1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
J [auth K]Ribosomal_L6e7nhmK1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
J [auth K]Ribosomal_L6_1e7nhmK2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
A [auth Z]Ribosomal_L27e7nhmZ1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
I [auth J]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
I [auth J]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
I [auth J]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
H [auth I]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
H [auth I]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
G [auth H]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
F [auth G]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
F [auth G]PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
F [auth G]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6Domain
ZA [auth 4]PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
YA [auth D]PF07650KH domain (KH_2)KH domainDomain
MA [auth 9]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36Domain
BA [auth 8]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
AA [auth 6]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
Z [auth 5]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
Y [auth 3]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
X [auth 2]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
W [auth 1]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
V [auth Y]PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress. Domain
U [auth X]PF17136Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24)Large ribosomal subunit protein uL24, C-terminal domainThis entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ...This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 makes very minor contributions to the biogenesis structure, and function of 60s ribosomal subunits [1]. However, RPL24 is essential to generate the first intermediate during 50s ribosomal subunits assembly [2]. RPL26 have an extra-ribosomal function to enhances p53 translation after DNA damage [3].
Domain
U [auth X]PF00467KOW motif (KOW)KOW motif- Family
T [auth W]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
B [auth P]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
B [auth P]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
S [auth V]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
R [auth U]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
Q [auth T]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
Q [auth T]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
P [auth S]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
P [auth S]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
O [auth R]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
O [auth R]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
N [auth Q]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
N [auth Q]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
M [auth O]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
M [auth O]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
L [auth N]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
L [auth N]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
K [auth M]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
K [auth M]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
J [auth K]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
J [auth K]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth J]50S ribosomal protein L5
H [auth I]50S ribosomal protein L4
G [auth H]50S ribosomal protein L3
F [auth G]50S ribosomal protein L2
ZA [auth 4]50S ribosomal protein L31 type B
YA [auth D]tRNA-fMet---
XA [auth c]30S ribosomal protein S2
E [auth B]5S rRNA---
WA [auth r]30S ribosomal protein S17
VA [auth m]30S ribosomal protein S12
UA [auth b]RNA (5'-R(P*GP*GP*AP*GP*GP*UP*NP*NP*NP*NP*NP*NP*AP*UP*G)-3')---
TA [auth g]30S ribosomal protein S6
SA [auth s]30S ribosomal protein S18
RA [auth i]30S ribosomal protein S8
QA [auth f]30S ribosomal protein S5
PA [auth j]30S ribosomal protein S9
OA [auth n]30S ribosomal protein S13
NA [auth t]30S ribosomal protein S19
D [auth a]16S rRNA---
MA [auth 9]50S ribosomal protein L36
LA [auth u]30S ribosomal protein S20
KA [auth q]30S ribosomal protein S16
JA [auth p]30S ribosomal protein S15
IA [auth o]30S ribosomal protein S14 type Z
HA [auth l]30S ribosomal protein S11
GA [auth k]30S ribosomal protein S10
FA [auth h]30S ribosomal protein S7
EA [auth e]30S ribosomal protein S4
DA [auth d]30S ribosomal protein S3
C [auth A]23S rRNA---
CA [auth 7]50S ribosomal protein L34
BA [auth 8]50S ribosomal protein L35
AA [auth 6]50S ribosomal protein L33 2
Z [auth 5]50S ribosomal protein L32
Y [auth 3]50S ribosomal protein L30
X [auth 2]50S ribosomal protein L29
W [auth 1]50S ribosomal protein L28
V [auth Y]50S ribosomal protein L25
U [auth X]50S ribosomal protein L24
T [auth W]50S ribosomal protein L23
B [auth P]50S ribosomal protein L16
S [auth V]50S ribosomal protein L22
R [auth U]50S ribosomal protein L21
Q [auth T]50S ribosomal protein L20
P [auth S]50S ribosomal protein L19
O [auth R]50S ribosomal protein L18
N [auth Q]50S ribosomal protein L17
M [auth O]50S ribosomal protein L15
L [auth N]50S ribosomal protein L14
K [auth M]50S ribosomal protein L13
J [auth K]50S ribosomal protein L6
A [auth Z]50S ribosomal protein L27

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth J]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
I [auth J]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
I [auth J]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
I [auth J]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
I [auth J]IPR002132Large ribosomal subunit protein uL5Family
I [auth J]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
H [auth I]IPR013005Large ribosomal subunit protein uL4-likeFamily
H [auth I]IPR002136Large ribosomal subunit protein uL4Family
H [auth I]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
G [auth H]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
G [auth H]IPR019927Large ribosomal subunit protein uL3, bacteria/organellaFamily
G [auth H]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
G [auth H]IPR000597Large ribosomal subunit protein uL3Family
F [auth G]IPR005880Large ribosomal subunit protein uL2, bacteria/organellaFamily
F [auth G]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
F [auth G]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
F [auth G]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
F [auth G]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
F [auth G]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
F [auth G]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
F [auth G]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
F [auth G]IPR002171Large ribosomal subunit protein uL2Family
ZA [auth 4]IPR002150Large ribosomal subunit protein bL31 type A/BFamily
ZA [auth 4]IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
ZA [auth 4]IPR027493Large ribosomal subunit protein bL31 type BFamily
ZA [auth 4]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
XA [auth c]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
XA [auth c]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
XA [auth c]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
XA [auth c]IPR001865Small ribosomal subunit protein uS2Family
WA [auth r]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
WA [auth r]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
WA [auth r]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
WA [auth r]IPR000266Small ribosomal subunit protein uS17Family
VA [auth m]IPR006032Small ribosomal subunit protein uS12Family
VA [auth m]IPR005679Ribosomal protein uS12, bacteriaFamily
VA [auth m]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
TA [auth g]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
TA [auth g]IPR000529Small ribosomal subunit protein bS6Family
TA [auth g]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
TA [auth g]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
TA [auth g]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
SA [auth s]IPR001648Small ribosomal subunit protein bS18Family
SA [auth s]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
SA [auth s]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
RA [auth i]IPR000630Small ribosomal subunit protein uS8Family
RA [auth i]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
RA [auth i]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
QA [auth f]IPR005712Small ribosomal subunit protein uS5, bacteriaFamily
QA [auth f]IPR000851Small ribosomal subunit protein uS5Family
QA [auth f]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
QA [auth f]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
QA [auth f]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
QA [auth f]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
QA [auth f]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
PA [auth j]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
PA [auth j]IPR023035Small ribosomal subunit protein uS9, bacteria/plastidFamily
PA [auth j]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
PA [auth j]IPR000754Small ribosomal subunit protein uS9Family
PA [auth j]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
OA [auth n]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
OA [auth n]IPR001892Small ribosomal subunit protein uS13Family
OA [auth n]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
OA [auth n]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
OA [auth n]IPR019980Small ribosomal subunit protein uS13, bacteriaFamily
NA [auth t]IPR005732Small ribosomal subunit protein uS19, bacteriaFamily
NA [auth t]IPR002222Small ribosomal subunit protein uS19Family
NA [auth t]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
NA [auth t]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
MA [auth 9]IPR000473Large ribosomal subunit protein bL36Family
MA [auth 9]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
LA [auth u]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
LA [auth u]IPR002583Small ribosomal subunit protein bS20Family
KA [auth q]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
KA [auth q]IPR000307Small ribosomal subunit protein bS16Family
JA [auth p]IPR005290Small ribosomal subunit protein uS15, bacteriaFamily
JA [auth p]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
JA [auth p]IPR000589Small ribosomal subunit protein uS15Family
IA [auth o]IPR023053Small ribosomal subunit protein uS14, bacteriaFamily
IA [auth o]IPR001209Small ribosomal subunit protein uS14Family
IA [auth o]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
IA [auth o]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
HA [auth l]IPR001971Small ribosomal subunit protein uS11Family
HA [auth l]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
HA [auth l]IPR019981Small ribosomal subunit protein uS11, bacteriaFamily
HA [auth l]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
GA [auth k]IPR001848Small ribosomal subunit protein uS10Family
GA [auth k]IPR027486Small ribosomal subunit protein uS10 domainDomain
GA [auth k]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
GA [auth k]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
FA [auth h]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
FA [auth h]IPR005717Small ribosomal subunit protein uS7, bacteria/organellaFamily
FA [auth h]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
FA [auth h]IPR000235Small ribosomal subunit protein uS7Family
FA [auth h]IPR023798Small ribosomal subunit protein uS7 domainDomain
EA [auth e]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
EA [auth e]IPR002942RNA-binding S4 domainDomain
EA [auth e]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
EA [auth e]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
EA [auth e]IPR022801Small ribosomal subunit protein uS4Family
EA [auth e]IPR005709Small ribosomal subunit protein uS4, bacteriaFamily
DA [auth d]IPR005704Small ribosomal subunit protein uS3, bacteriaFamily
DA [auth d]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
DA [auth d]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
DA [auth d]IPR004087K Homology domainDomain
DA [auth d]IPR004044K Homology domain, type 2Domain
DA [auth d]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
DA [auth d]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
DA [auth d]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
CA [auth 7]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
CA [auth 7]IPR000271Large ribosomal subunit protein bL34Family
BA [auth 8]IPR021137Large ribosomal subunit protein bL35-likeFamily
BA [auth 8]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
BA [auth 8]IPR001706Large ribosomal subunit protein bL35Family
BA [auth 8]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
AA [auth 6]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AA [auth 6]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
AA [auth 6]IPR001705Large ribosomal subunit protein bL33Family
AA [auth 6]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
Z [auth 5]IPR002677Large ribosomal subunit protein bL32Family
Z [auth 5]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
Z [auth 5]IPR044957Large ribosomal subunit protein bL32, bacteriaFamily
Y [auth 3]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
Y [auth 3]IPR005996Large ribosomal subunit protein uL30, bacteriaFamily
Y [auth 3]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
X [auth 2]IPR050063Universal ribosomal protein uL29Family
X [auth 2]IPR001854Large ribosomal subunit protein uL29Family
X [auth 2]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
W [auth 1]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
W [auth 1]IPR050096Bacterial ribosomal protein bL28Family
W [auth 1]IPR001383Large ribosomal subunit protein bL28, bacteriaFamily
W [auth 1]IPR026569Large ribosomal subunit protein bL28Family
W [auth 1]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
V [auth Y]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
V [auth Y]IPR001021Ribosomal protein bL25, long-formFamily
V [auth Y]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
V [auth Y]IPR037121Large ribosomal subunit protein bL25, C-terminalHomologous Superfamily
V [auth Y]IPR020057Large ribosomal subunit protein bL25, beta domainDomain
V [auth Y]IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
V [auth Y]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
U [auth X]IPR003256Large ribosomal subunit protein uL24Family
U [auth X]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
U [auth X]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
U [auth X]IPR005824KOWDomain
U [auth X]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
U [auth X]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
T [auth W]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
T [auth W]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
T [auth W]IPR013025Large ribosomal subunit protein uL23-likeFamily
B [auth P]IPR000114Large ribosomal subunit protein uL16, bacteriaFamily
B [auth P]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
B [auth P]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
B [auth P]IPR016180Large ribosomal subunit protein uL16 domainDomain
B [auth P]IPR047873Large ribosomal subunit protein uL16Family
S [auth V]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
S [auth V]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
S [auth V]IPR001063Large ribosomal subunit protein uL22Family
S [auth V]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
S [auth V]IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily
R [auth U]IPR028909Large ribosomal subunit protein bL21-likeFamily
R [auth U]IPR001787Large ribosomal subunit protein bL21Family
R [auth U]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
Q [auth T]IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
Q [auth T]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
Q [auth T]IPR005813Large ribosomal subunit protein bL20Family
P [auth S]IPR001857Large ribosomal subunit protein bL19Family
P [auth S]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
P [auth S]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
P [auth S]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
O [auth R]IPR005484Large ribosomal subunit protein uL18, bacterial/plantae/animaliaFamily
O [auth R]IPR004389Large ribosomal subunit protein uL18, bacteriaFamily
N [auth Q]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
N [auth Q]IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
N [auth Q]IPR000456Large ribosomal subunit protein bL17Family
M [auth O]IPR021131Large ribosomal subunit protein uL15/eL18Domain
M [auth O]IPR030878Large ribosomal subunit protein uL15Family
M [auth O]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
M [auth O]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
M [auth O]IPR005749Large ribosomal subunit protein uL15, bacteriaFamily
L [auth N]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
L [auth N]IPR000218Large ribosomal subunit protein uL14Family
L [auth N]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
L [auth N]IPR005745Large ribosomal subunit protein uL14, bacteriaFamily
K [auth M]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
K [auth M]IPR005822Large ribosomal subunit protein uL13Family
K [auth M]IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
K [auth M]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
J [auth K]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
J [auth K]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
J [auth K]IPR000702Large ribosomal subunit protein uL6-likeFamily
J [auth K]IPR019906Large ribosomal subunit protein uL6, bacteriaFamily
J [auth K]IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
A [auth Z]IPR001684Large ribosomal subunit protein bL27Family
A [auth Z]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site