7P1T | pdb_00007p1t

Cryo-EM structure of encapsulin from Mycobacterium tuberculosis

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
ZA	Linocin_M18	e7p1tZA1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
Z	Linocin_M18	e7p1tZ1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
YA	Linocin_M18	e7p1tYA1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
Y	Linocin_M18	e7p1tY1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
XA	Linocin_M18	e7p1tXA1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
X	Linocin_M18	e7p1tX1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
WA	Linocin_M18	e7p1tWA1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
W	Linocin_M18	e7p1tW1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
VA	Linocin_M18	e7p1tVA1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
V	Linocin_M18	e7p1tV1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
UA	Linocin_M18	e7p1tUA1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
U	Linocin_M18	e7p1tU1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
TA	Linocin_M18	e7p1tTA1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
T	Linocin_M18	e7p1tT1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
SA	Linocin_M18	e7p1tSA1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
S	Linocin_M18	e7p1tS1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
RA	Linocin_M18	e7p1tRA1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
R	Linocin_M18	e7p1tR1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
QA	Linocin_M18	e7p1tQA1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
Q	Linocin_M18	e7p1tQ1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
PA	Linocin_M18	e7p1tPA1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
P	Linocin_M18	e7p1tP1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
OA	Linocin_M18	e7p1tOA1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
O	Linocin_M18	e7p1tO1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
NA	Linocin_M18	e7p1tNA1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
N	Linocin_M18	e7p1tN1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
MA	Linocin_M18	e7p1tMA1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
M	Linocin_M18	e7p1tM1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
LA	Linocin_M18	e7p1tLA1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
L	Linocin_M18	e7p1tL1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
KA	Linocin_M18	e7p1tKA1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
K	Linocin_M18	e7p1tK1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
JA	Linocin_M18	e7p1tJA1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
J	Linocin_M18	e7p1tJ1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
IA	Linocin_M18	e7p1tIA1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
I	Linocin_M18	e7p1tI1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
HB	Linocin_M18	e7p1tHB1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
HA	Linocin_M18	e7p1tHA1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
H	Linocin_M18	e7p1tH1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
GB	Linocin_M18	e7p1tGB1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
GA	Linocin_M18	e7p1tGA1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
G	Linocin_M18	e7p1tG1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
FB	Linocin_M18	e7p1tFB1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
FA	Linocin_M18	e7p1tFA1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
F	Linocin_M18	e7p1tF1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
EB	Linocin_M18	e7p1tEB1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
EA	Linocin_M18	e7p1tEA1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
E	Linocin_M18	e7p1tE1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
DB	Linocin_M18	e7p1tDB1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
DA	Linocin_M18	e7p1tDA1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
D	Linocin_M18	e7p1tD1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
CB	Linocin_M18	e7p1tCB1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
CA	Linocin_M18	e7p1tCA1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
C	Linocin_M18	e7p1tC1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
BB	Linocin_M18	e7p1tBB1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
BA	Linocin_M18	e7p1tBA1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
B	Linocin_M18	e7p1tB1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
AB	Linocin_M18	e7p1tAB1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
AA	Linocin_M18	e7p1tAA1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)
A	Linocin_M18	e7p1tA1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Linocin_M18	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, AA, AB, B, BA A, AA, AB, B, BA, BB, C, CA, CB, D, DA, DB, E, EA, EB, F, FA, FB, G, GA, GB, H, HA, HB, I, IA, J, JA, K, KA, L, LA, M, MA, N, NA, O, OA, P, PA, Q, QA, R, RA, S, SA, T, TA, U, UA, V, VA, W, WA, X, XA, Y, YA, Z, ZA	PF04454	Encapsulating protein for peroxidase (Linocin_M18)	Encapsulating protein for peroxidase	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, AA, AB, B, BA A, AA, AB, B, BA, BB, C, CA, CB, D, DA, DB, E, EA, EB, F, FA, FB, G, GA, GB, H, HA, HB, I, IA, J, JA, K, KA, L, LA, M, MA, N, NA, O, OA, P, PA, Q, QA, R, RA, S, SA, T, TA, U, UA, V, VA, W, WA, X, XA, Y, YA, Z, ZA	29 kDa antigen, Cfp29	-	-	cell periphery cellular anatomical structure plasma membrane membrane extracellular region intracellular organelle intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle encapsulin nanocompartment

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, AA, AB, B, BA A, AA, AB, B, BA, BB, C, CA, CB, D, DA, DB, E, EA, EB, F, FA, FB, G, GA, GB, H, HA, HB, I, IA, J, JA, K, KA, L, LA, M, MA, N, NA, O, OA, P, PA, Q, QA, R, RA, S, SA, T, TA, U, UA, V, VA, W, WA, X, XA, Y, YA, Z, ZA	IPR007544	Type 1 encapsulin shell protein	Family
A, AA, AB, B, BA A, AA, AB, B, BA, BB, C, CA, CB, D, DA, DB, E, EA, EB, F, FA, FB, G, GA, GB, H, HA, HB, I, IA, J, JA, K, KA, L, LA, M, MA, N, NA, O, OA, P, PA, Q, QA, R, RA, S, SA, T, TA, U, UA, V, VA, W, WA, X, XA, Y, YA, Z, ZA	IPR051429	Encapsulin nanocompartment	Family