7PHB | pdb_00007phb

70S ribosome with A- and P-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
I [auth F]SCOP2B SuperfamilyRibosomal protein S7 8107618 3000799 SCOP2B (2022-06-29)
F [auth C]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8107598 3001473 SCOP2B (2022-06-29)
XA [auth z]SCOP2B SuperfamilyZn-binding ribosomal proteins 8107630 3001320 SCOP2B (2022-06-29)
WA [auth y]SCOP2B SuperfamilyZn-binding ribosomal proteins 8107612 3001320 SCOP2B (2022-06-29)
SA [auth u]SCOP2B SuperfamilyRibosomal L27 protein-like 8107616 3000539 SCOP2B (2022-06-29)
RA [auth t]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8107660 3000334 SCOP2B (2022-06-29)
OA [auth q]SCOP2B Superfamilyl21p-like 8107634 3002005 SCOP2B (2022-06-29)
NA [auth p]SCOP2B SuperfamilyRibosomal protein L20 8107632 3000563 SCOP2B (2022-06-29)
MA [auth o]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8107604 3000334 SCOP2B (2022-06-29)
LA [auth n]SCOP2B SuperfamilyTranslational machinery components 8107652 3000571 SCOP2B (2022-06-29)
KA [auth m]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8107666 3000995 SCOP2B (2022-06-29)
JA [auth l]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8107596 3000884 SCOP2B (2022-06-29)
IA [auth k]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8107650 3001045 SCOP2B (2022-06-29)
HA [auth j]SCOP2B Superfamily50S Ribosomal protein L14-like 8107662 3000433 SCOP2B (2022-06-29)
GA [auth i]SCOP2B SuperfamilyRibosomal protein L13 8107608 3001134 SCOP2B (2022-06-29)
C [auth 2]SCOP2B SuperfamilyRibosomal protein L36 8107602 3001346 SCOP2B (2022-06-29)
BA [auth d]SCOP2B SuperfamilyRL5-like 8107658 3001709 SCOP2B (2022-06-29)
AA [auth c]SCOP2B SuperfamilyRibosomal protein L4 8107624 3001146 SCOP2B (2022-06-29)
Z [auth b]SCOP2B SuperfamilyTranslational proteins 8107626 3000811 SCOP2B (2022-06-29)
U [auth R]SCOP2B SuperfamilyRibosomal protein S19 8107622 3000686 SCOP2B (2022-06-29)
B [auth 1]SCOP2B SuperfamilyL35p-like 8107614 3000790 SCOP2B (2022-06-29)
S [auth P]SCOP2B SuperfamilyNucleic acid-binding proteins 8107664 3000135 SCOP2B (2022-06-29)
Q [auth N]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8107606 3001284 SCOP2B (2022-06-29)
P [auth M]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8107656 3000068 SCOP2B (2022-06-29)
O [auth L]SCOP2B SuperfamilyS13-like H2TH domain 8107648 3000053 SCOP2B (2022-06-29)
N [auth K]SCOP2B SuperfamilyNucleic acid-binding proteins 8107620 3000135 SCOP2B (2022-06-29)
M [auth J]SCOP2B SuperfamilyTranslational machinery components 8107646 3000571 SCOP2B (2022-06-29)
L [auth I]SCOP2B SuperfamilyRibosomal protein S10 8107628 3001336 SCOP2B (2022-06-29)
K [auth H]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8107610 3000100 SCOP2B (2022-06-29)
J [auth G]SCOP2B SuperfamilyRibosomal protein S8 8107654 3000709 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
I [auth F]Ribosomal_S7_1e7phbF1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
G [auth D]Ribosomal_S5_Ce7phbD2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
G [auth D]Ribosomal_S5e7phbD1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
F [auth C]S4e7phbC1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
XA [auth z]Ribosomal_L33e7phbz1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
E [auth B]Ribosomal_S3_Ce7phbB1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
E [auth B]KH_2_1e7phbB2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
WA [auth y]Ribosomal_L32pe7phby1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
VA [auth x]Ribosomal_L31e7phbx1 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
TA [auth v]Ribosomal_L28e7phbv1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
SA [auth u]Ribosomal_L27e7phbu1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
RA [auth t]ribosomal_L24_1e7phbt1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24_1ECOD (1.6)
QA [auth s]Ribosomal_L23_2e7phbs1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
OA [auth q]Ribosomal_L21pe7phbq1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
NA [auth p]Ribosomal_L20e7phbp1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
D [auth A]Ribosomal_S2e7phbA1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
MA [auth o]Ribosomal_L19e7phbo1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
LA [auth n]Ribosomal_L18pe7phbn1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
KA [auth m]Ribosomal_L17_1e7phbm1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
JA [auth l]Ribosomal_L16e7phbl1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
IA [auth k]Ribosomal_L27Ae7phbk1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
HA [auth j]Ribosomal_L14e7phbj1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
GA [auth i]Ribosomal_L13e7phbi1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
FA [auth h]Ribosomal_L11e7phbh2 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11ECOD (1.6)
FA [auth h]Ribosomal_L11_Ne7phbh1 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: Ribosomal_L11_NECOD (1.6)
EA [auth g]Ribosomal_L10e7phbg1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: Ribosomal_L10ECOD (1.6)
DA [auth f]Ribosomal_L9_Ne7phbf1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
DA [auth f]Ribosomal_L9_Ce7phbf2 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: Ribosomal_L9_CECOD (1.6)
C [auth 2]Ribosomal_L36e7phb21 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: Ribosomal_L36ECOD (1.6)
CA [auth e]Ribosomal_L6e7phbe1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
CA [auth e]Ribosomal_L6_1e7phbe2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
BA [auth d]Ribosomal_L5_Ce7phbd1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
AA [auth c]Ribosomal_L4e7phbc1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
Z [auth b]Ribosomal_L3e7phbb1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
Y [auth a]Ribosomal_L2_1e7phba2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
Y [auth a]Ribosomal_L2_Ce7phba1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
W [auth T]F_UNCLASSIFIEDe7phbT1 A: extended segmentsX: 30S ribosomal protein S21 (From Topology)H: 30S ribosomal protein S21 (From Topology)T: 30S ribosomal protein S21F: F_UNCLASSIFIEDECOD (1.6)
V [auth S]Ribosomal_S20pe7phbS1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
U [auth R]Ribosomal_S19e7phbR1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
T [auth Q]Ribosomal_S18e7phbQ1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
B [auth 1]Ribosomal_L35pe7phb11 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
S [auth P]Ribosomal_S17_1e7phbP1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
R [auth O]Ribosomal_S16_1e7phbO1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16_1ECOD (1.6)
Q [auth N]Ribosomal_S15_1e7phbN1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
P [auth M]Ribosomal_S14e7phbM1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
O [auth L]Ribosomal_S13_1e7phbL1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
N [auth K]Ribosom_S12_S23e7phbK1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
M [auth J]Ribosomal_S11e7phbJ1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
L [auth I]Ribosomal_S10e7phbI1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
K [auth H]Ribosomal_S9e7phbH1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
J [auth G]Ribosomal_S8_Ne7phbG1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
J [auth G]Ribosomal_S8_Ce7phbG2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
A [auth 0]Ribosomal_L34e7phb01 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
I [auth F]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domainDomain
I [auth F]PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domainDomain
H [auth E]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
H [auth E]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6Domain
G [auth D]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
G [auth D]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
G [auth D]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
G [auth D]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
F [auth C]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
F [auth C]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
F [auth C]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
E [auth B]PF07650KH domain (KH_2)KH domainDomain
E [auth B]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
E [auth B]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
D [auth A]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
D [auth A]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
D [auth A]PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
C [auth 2]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36Domain
X [auth Z]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
W [auth T]PF17136Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24)Large ribosomal subunit protein uL24, C-terminal domainThis entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ...This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 makes very minor contributions to the biogenesis structure, and function of 60s ribosomal subunits [1]. However, RPL24 is essential to generate the first intermediate during 50s ribosomal subunits assembly [2]. RPL26 have an extra-ribosomal function to enhances p53 translation after DNA damage [3].
Domain
W [auth T]PF00467KOW motif (KOW)KOW motif- Family
V [auth S]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
U [auth R]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
U [auth R]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
T [auth Q]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
T [auth Q]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
B [auth 1]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
S [auth P]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
S [auth P]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
R [auth O]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
R [auth O]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
Q [auth N]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
Q [auth N]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
P [auth M]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
P [auth M]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
O [auth L]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
N [auth K]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
N [auth K]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
M [auth J]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
M [auth J]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
L [auth I]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
L [auth I]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
K [auth H]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. Domain
K [auth H]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
K [auth H]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domainDomain
J [auth G]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
A [auth 0]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth F]30S ribosomal protein S7
H [auth E]30S ribosomal protein S6
G [auth D]30S ribosomal protein S5
F [auth C]30S ribosomal protein S4
DB [auth Y]mRNA---
BB [auth 6],
CB [auth 7]
tRNA-Phe---
AB [auth 5]16S ribosomal RNA---
ZA [auth 4]5S ribosomal RNA---
YA [auth 3]23S ribosomal RNA---
XA [auth z]50S ribosomal protein L33 1
E [auth B]30S ribosomal protein S3
WA [auth y]50S ribosomal protein L32
VA [auth x]50S ribosomal protein L31
UA [auth w]50S ribosomal protein L29
TA [auth v]50S ribosomal protein L28
SA [auth u]50S ribosomal protein L27
RA [auth t]50S ribosomal protein L24
QA [auth s]50S ribosomal protein L23
PA [auth r]50S ribosomal protein L22
OA [auth q]50S ribosomal protein L21
NA [auth p]50S ribosomal protein L20
D [auth A]30S ribosomal protein S2
MA [auth o]50S ribosomal protein L19
LA [auth n]50S ribosomal protein L18
KA [auth m]50S ribosomal protein L17
JA [auth l]50S ribosomal protein L16
IA [auth k]50S ribosomal protein L15
HA [auth j]50S ribosomal protein L14
GA [auth i]50S ribosomal protein L13
FA [auth h]50S ribosomal protein L11
EA [auth g]50S ribosomal protein L10
DA [auth f]50S ribosomal protein L9
C [auth 2]50S ribosomal protein L36
CA [auth e]50S ribosomal protein L6
BA [auth d]50S ribosomal protein L5
AA [auth c]50S ribosomal protein L4
Z [auth b]50S ribosomal protein L3
Y [auth a]50S ribosomal protein L2
X [auth Z]nascent peptide---
W [auth T]30S ribosomal protein S21
V [auth S]30S ribosomal protein S20
U [auth R]30S ribosomal protein S19
T [auth Q]30S ribosomal protein S18
B [auth 1]50S ribosomal protein L35
S [auth P]30S ribosomal protein S17
R [auth O]30S ribosomal protein S16
Q [auth N]30S ribosomal protein S15
P [auth M]30S ribosomal protein S14 type Z
O [auth L]30S ribosomal protein S13
N [auth K]30S ribosomal protein S12
M [auth J]30S ribosomal protein S11
L [auth I]30S ribosomal protein S10
K [auth H]30S ribosomal protein S9
J [auth G]30S ribosomal protein S8
A [auth 0]50S ribosomal protein L34

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth F]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
I [auth F]IPR000235Small ribosomal subunit protein uS7Family
I [auth F]IPR005717Small ribosomal subunit protein uS7, bacteria/organellaFamily
I [auth F]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
I [auth F]IPR023798Small ribosomal subunit protein uS7 domainDomain
H [auth E]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
H [auth E]IPR000529Small ribosomal subunit protein bS6Family
H [auth E]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
H [auth E]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
H [auth E]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
G [auth D]IPR005712Small ribosomal subunit protein uS5, bacteriaFamily
G [auth D]IPR000851Small ribosomal subunit protein uS5Family
G [auth D]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
G [auth D]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
G [auth D]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
G [auth D]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
G [auth D]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
F [auth C]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
F [auth C]IPR002942RNA-binding S4 domainDomain
F [auth C]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
F [auth C]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
F [auth C]IPR022801Small ribosomal subunit protein uS4Family
F [auth C]IPR005709Small ribosomal subunit protein uS4, bacteriaFamily
XA [auth z]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
XA [auth z]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
XA [auth z]IPR001705Large ribosomal subunit protein bL33Family
XA [auth z]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
E [auth B]IPR005704Small ribosomal subunit protein uS3, bacteriaFamily
E [auth B]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
E [auth B]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
E [auth B]IPR004087K Homology domainDomain
E [auth B]IPR004044K Homology domain, type 2Domain
E [auth B]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
E [auth B]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
E [auth B]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
WA [auth y]IPR002677Large ribosomal subunit protein bL32Family
WA [auth y]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
WA [auth y]IPR044957Large ribosomal subunit protein bL32, bacteriaFamily
VA [auth x]IPR002150Large ribosomal subunit protein bL31 type A/BFamily
VA [auth x]IPR027491Large ribosomal subunit protein bL31 type AFamily
VA [auth x]IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
VA [auth x]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
UA [auth w]IPR050063Universal ribosomal protein uL29Family
UA [auth w]IPR001854Large ribosomal subunit protein uL29Family
UA [auth w]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
UA [auth w]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
TA [auth v]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
TA [auth v]IPR050096Bacterial ribosomal protein bL28Family
TA [auth v]IPR001383Large ribosomal subunit protein bL28, bacteriaFamily
TA [auth v]IPR026569Large ribosomal subunit protein bL28Family
TA [auth v]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
SA [auth u]IPR001684Large ribosomal subunit protein bL27Family
SA [auth u]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
RA [auth t]IPR003256Large ribosomal subunit protein uL24Family
RA [auth t]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
RA [auth t]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
RA [auth t]IPR005824KOWDomain
RA [auth t]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
RA [auth t]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
QA [auth s]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
QA [auth s]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
QA [auth s]IPR013025Large ribosomal subunit protein uL23-likeFamily
PA [auth r]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
PA [auth r]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
PA [auth r]IPR001063Large ribosomal subunit protein uL22Family
PA [auth r]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
PA [auth r]IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily
OA [auth q]IPR028909Large ribosomal subunit protein bL21-likeFamily
OA [auth q]IPR001787Large ribosomal subunit protein bL21Family
OA [auth q]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
OA [auth q]IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site
NA [auth p]IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
NA [auth p]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
NA [auth p]IPR005813Large ribosomal subunit protein bL20Family
D [auth A]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
D [auth A]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
D [auth A]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
D [auth A]IPR001865Small ribosomal subunit protein uS2Family
MA [auth o]IPR001857Large ribosomal subunit protein bL19Family
MA [auth o]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
MA [auth o]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
MA [auth o]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
LA [auth n]IPR005484Large ribosomal subunit protein uL18, bacterial/plantae/animaliaFamily
LA [auth n]IPR004389Large ribosomal subunit protein uL18, bacteriaFamily
KA [auth m]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
KA [auth m]IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
KA [auth m]IPR000456Large ribosomal subunit protein bL17Family
JA [auth l]IPR000114Large ribosomal subunit protein uL16, bacteriaFamily
JA [auth l]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
JA [auth l]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
JA [auth l]IPR016180Large ribosomal subunit protein uL16 domainDomain
JA [auth l]IPR047873Large ribosomal subunit protein uL16Family
IA [auth k]IPR021131Large ribosomal subunit protein uL15/eL18Domain
IA [auth k]IPR030878Large ribosomal subunit protein uL15Family
IA [auth k]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
IA [auth k]IPR005749Large ribosomal subunit protein uL15, bacteriaFamily
HA [auth j]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
HA [auth j]IPR000218Large ribosomal subunit protein uL14Family
HA [auth j]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
HA [auth j]IPR005745Large ribosomal subunit protein uL14, bacteriaFamily
GA [auth i]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
GA [auth i]IPR005822Large ribosomal subunit protein uL13Family
GA [auth i]IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
GA [auth i]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
FA [auth h]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
FA [auth h]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
FA [auth h]IPR000911Ribosomal protein uL11Family
FA [auth h]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
FA [auth h]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
FA [auth h]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
FA [auth h]IPR006519Large ribosomal subunit protein uL11, bacteriaFamily
EA [auth g]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
EA [auth g]IPR001790Large ribosomal subunit protein uL10Family
EA [auth g]IPR022973Large ribosomal subunit protein uL10, bacteriaFamily
EA [auth g]IPR047865Large ribosomal subunit protein uL10, bacteria/organellaFamily
EA [auth g]IPR002363Large ribosomal subunit protein uL10, conserved site, bacteriaConserved Site
DA [auth f]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
DA [auth f]IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
DA [auth f]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
DA [auth f]IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
DA [auth f]IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
DA [auth f]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
DA [auth f]IPR000244Large ribosomal subunit protein bL9Family
C [auth 2]IPR000473Large ribosomal subunit protein bL36Family
C [auth 2]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
CA [auth e]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
CA [auth e]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
CA [auth e]IPR000702Large ribosomal subunit protein uL6-likeFamily
CA [auth e]IPR019906Large ribosomal subunit protein uL6, bacteriaFamily
CA [auth e]IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
BA [auth d]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
BA [auth d]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
BA [auth d]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
BA [auth d]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
BA [auth d]IPR002132Large ribosomal subunit protein uL5Family
BA [auth d]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
AA [auth c]IPR013005Large ribosomal subunit protein uL4-likeFamily
AA [auth c]IPR002136Large ribosomal subunit protein uL4Family
AA [auth c]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
Z [auth b]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
Z [auth b]IPR019927Large ribosomal subunit protein uL3, bacteria/organellaFamily
Z [auth b]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
Z [auth b]IPR000597Large ribosomal subunit protein uL3Family
Y [auth a]IPR005880Large ribosomal subunit protein uL2, bacteria/organellaFamily
Y [auth a]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
Y [auth a]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
Y [auth a]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Y [auth a]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
Y [auth a]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
Y [auth a]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
Y [auth a]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
Y [auth a]IPR002171Large ribosomal subunit protein uL2Family
W [auth T]IPR001911Small ribosomal subunit protein bS21Family
V [auth S]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
V [auth S]IPR002583Small ribosomal subunit protein bS20Family
U [auth R]IPR005732Small ribosomal subunit protein uS19, bacteriaFamily
U [auth R]IPR002222Small ribosomal subunit protein uS19Family
U [auth R]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
U [auth R]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
T [auth Q]IPR001648Small ribosomal subunit protein bS18Family
T [auth Q]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
T [auth Q]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
B [auth 1]IPR021137Large ribosomal subunit protein bL35-likeFamily
B [auth 1]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
B [auth 1]IPR001706Large ribosomal subunit protein bL35Family
B [auth 1]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
S [auth P]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
S [auth P]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
S [auth P]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
S [auth P]IPR000266Small ribosomal subunit protein uS17Family
R [auth O]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
R [auth O]IPR000307Small ribosomal subunit protein bS16Family
Q [auth N]IPR005290Small ribosomal subunit protein uS15, bacteriaFamily
Q [auth N]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
Q [auth N]IPR000589Small ribosomal subunit protein uS15Family
P [auth M]IPR023053Small ribosomal subunit protein uS14, bacteriaFamily
P [auth M]IPR001209Small ribosomal subunit protein uS14Family
P [auth M]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
P [auth M]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
O [auth L]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
O [auth L]IPR001892Small ribosomal subunit protein uS13Family
O [auth L]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
O [auth L]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
O [auth L]IPR019980Small ribosomal subunit protein uS13, bacteriaFamily
N [auth K]IPR006032Small ribosomal subunit protein uS12Family
N [auth K]IPR005679Ribosomal protein uS12, bacteriaFamily
N [auth K]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
M [auth J]IPR001971Small ribosomal subunit protein uS11Family
M [auth J]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
M [auth J]IPR019981Small ribosomal subunit protein uS11, bacteriaFamily
M [auth J]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
L [auth I]IPR001848Small ribosomal subunit protein uS10Family
L [auth I]IPR027486Small ribosomal subunit protein uS10 domainDomain
L [auth I]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
L [auth I]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
K [auth H]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
K [auth H]IPR023035Small ribosomal subunit protein uS9, bacteria/plastidFamily
K [auth H]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
K [auth H]IPR000754Small ribosomal subunit protein uS9Family
K [auth H]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
J [auth G]IPR000630Small ribosomal subunit protein uS8Family
J [auth G]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
J [auth G]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
A [auth 0]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
A [auth 0]IPR000271Large ribosomal subunit protein bL34Family