7QIW | pdb_00007qiw

Specific features and methylation sites of a plant ribosome. 60S ribosomal subunit.


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
H [auth K]Ribosomal_L6_2e7qiwK1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_2ECOD (1.6)
H [auth K]Ribosomal_L6e7qiwK2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
G [auth J]Ribosomal_L7Ae_1e7qiwJ1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7Ae_1ECOD (1.6)
F [auth I]Ribosomal_L30_1e7qiwI1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30_1ECOD (1.6)
E [auth H]Ribosomal_L6ee7qiwH1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L6eECOD (1.6)
OA [auth r]Ribosomal_L28ee7qiwr1 A: a+b two layersX: RPL28 (From Topology)H: RPL28 (From Topology)T: RPL28F: Ribosomal_L28eECOD (1.6)
NA [auth q]Ribosomal_L37aee7qiwq1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37aeECOD (1.6)
D [auth G]Ribosomal_L5ee7qiwG1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L5eECOD (1.6)
MA [auth p]Ribosomal_L44e7qiwp1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L44ECOD (1.6)
LA [auth o]Ribosomal_L40ee7qiwo1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L40eECOD (1.6)
KA [auth n]Ribosomal_L39e7qiwn1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: Ribosomal_L39ECOD (1.6)
JA [auth m]Ribosomal_L38ee7qiwm1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: Ribosomal_L38eECOD (1.6)
IA [auth l]Ribosomal_L37ee7qiwl1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37eECOD (1.6)
GA [auth j]Ribosomal_L29_2e7qiwj1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29_2ECOD (1.6)
FA [auth i]Ribosomal_L34ee7qiwi1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: Ribosomal_L34eECOD (1.6)
EA [auth h]Ribosomal_L35Aee7qiwh1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L35AeECOD (1.6)
DA [auth g]Ribosomal_L32ee7qiwg1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: Ribosomal_L32eECOD (1.6)
C [auth E]Ribosomal_L3e7qiwE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
CA [auth f]Ribosomal_L31ee7qiwf1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: Ribosomal_L31eECOD (1.6)
BA [auth e]Ribosomal_L7Aee7qiwe1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
AA [auth d]Ribosomal_L29ee7qiwd1 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: Ribosomal_L29eECOD (1.6)
Z [auth c]Ribosomal_L18e7qiwc1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
Y [auth b]Ribosomal_L27ee7qiwb1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L27eECOD (1.6)
X [auth a]Ribosomal_L26e7qiwa1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L26ECOD (1.6)
W [auth Z]Ribosomal_L23_3e7qiwZ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_3ECOD (1.6)
V [auth Y]Ribosomal_L24ee7qiwY1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_L24eECOD (1.6)
U [auth X]Ribosomal_L14e7qiwX1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
T [auth W]Ribosomal_L22ee7qiwW1 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: Ribosomal_L22eECOD (1.6)
B [auth F]Ribosomal_L4e7qiwF1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
B [auth F]Ribos_L4_asso_Ce7qiwF2 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: Ribos_L4_asso_CECOD (1.6)
S [auth V]Ribosomal_L21ee7qiwV1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L21eECOD (1.6)
R [auth U]Ribosomal_L18Ae7qiwU1 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: Ribosomal_L18AECOD (1.6)
Q [auth T]Ribosomal_L19e_Ne7qiwT2 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: Ribosomal_L19e_NECOD (1.6)
Q [auth T]Ribosomal_L19e_Ce7qiwT1 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: Ribosomal_L19e_CECOD (1.6)
O [auth R]Ribosomal_L22e7qiwR1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
N [auth Q]Ribosomal_L13e7qiwQ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
M [auth P]Ribosomal_L15ee7qiwP1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L15eECOD (1.6)
L [auth O]Ribosomal_L14ee7qiwO1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L14eECOD (1.6)
K [auth N]Ribosomal_L13ee7qiwN1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: Ribosomal_L13eECOD (1.6)
J [auth M]Ribosomal_L5_Ce7qiwM1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
A [auth D]Ribosomal_L2_1e7qiwD2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
A [auth D]Ribosomal_L2_C_2e7qiwD1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_C_2ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
I [auth L]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
I [auth L]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
H [auth K]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
H [auth K]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
G [auth J]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
G [auth J]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
F [auth I]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1]. Domain
F [auth I]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
E [auth H]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
E [auth H]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35AeThis entry represents the ribosomal eL33 previously known as L35A, eukaryotic and archaebacterial ribosomal proteins. Domain
D [auth G]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
D [auth G]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins. Domain
D [auth G]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
W [auth Z]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
V [auth Y]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24eDomain
U [auth X]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
B [auth F]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins. Domain
B [auth F]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
B [auth F]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
R [auth U]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A. Domain
Q [auth T]PF01280Ribosomal protein L19e, N-terminal domain (Ribosomal_L19e)Ribosomal protein L19e, N-terminal domainThis domain is found at the N-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology. Domain
P [auth S]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
O [auth R]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
O [auth R]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
N [auth Q]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
N [auth Q]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
M [auth P]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
M [auth P]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
L [auth O]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e familyBovine L40 has been identified as a secondary RNA binding protein [1]. L40 is fused to a ubiquitin protein [2]. Domain
L [auth O]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
K [auth N]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
K [auth N]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
J [auth M]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
J [auth M]PF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
J [auth M]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
A [auth D]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
A [auth D]PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth L]60S ribosomal protein L10
H [auth K]60S ribosomal protein uL6
G [auth J]Ribosomal_L7Ae domain-containing protein
F [auth I]Thaliana 60S ribosomal protein L7
E [auth H]Ribosomal_L6e_N domain-containing protein
SA [auth 8]5.8S rRNA---
RA [auth 5]5S rRNA---
QA [auth 2]25S rRNA---
PA [auth s]tRNA---
OA [auth r]Ribosomal_L28e domain-containing protein
NA [auth q]60S ribosomal protein eL43
D [auth G]Ribosomal_L18_c domain-containing protein
MA [auth p]60S ribosomal protein eL42
LA [auth o]Ubiquitin-like domain-containing protein
KA [auth n]60S ribosomal protein eL39
JA [auth m]60S ribosomal protein L38
IA [auth l]Ribosomal protein L37
HA [auth k]60S ribosomal protein L36
GA [auth j]Similar to 60S ribosomal protein L35
FA [auth i]60S ribosomal protein eL34
EA [auth h]60S ribosomal protein eL33
DA [auth g]60S ribosomal protein eL32
C [auth E]Ribosomal protein L3
CA [auth f]60S ribosomal protein eL31
BA [auth e]Ribosomal_L7Ae domain-containing protein -
AA [auth d]60S ribosomal protein L29
Z [auth c]Putative 60S ribosomal protein L27a-3-like
Y [auth b]60S ribosomal protein L27
X [auth a]KOW domain-containing protein
W [auth Z]Ribosomal_L23eN domain-containing protein
V [auth Y]TRASH domain-containing protein
U [auth X]60S ribosomal protein uL14
T [auth W]60S ribosomal protein eL22
B [auth F]Ribos_L4_asso_C domain-containing protein
S [auth V]60S ribosomal protein eL21
R [auth U]60S ribosomal protein L18a
Q [auth T]Ribosomal protein L19
P [auth S]Ribosomal_L18e/L15P domain-containing protein
O [auth R]50S ribosomal protein L22, chloroplastic
N [auth Q]60S ribosomal protein uL13
M [auth P]Ribosomal protein L15
L [auth O]Ribosomal_L14e domain-containing protein
K [auth N]60S ribosomal protein L13
J [auth M]60S ribosomal protein uL5
A [auth D]60S ribosomal protein L8

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth L]IPR001197Large ribosomal subunit protein uL16, eukaryota/archaeaFamily
I [auth L]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
I [auth L]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryota/archaeaConserved Site
I [auth L]IPR016180Large ribosomal subunit protein uL16 domainDomain
I [auth L]IPR047873Large ribosomal subunit protein uL16Family
H [auth K]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
H [auth K]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
H [auth K]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
H [auth K]IPR000702Large ribosomal subunit protein uL6-likeFamily
G [auth J]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
G [auth J]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
G [auth J]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
G [auth J]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
G [auth J]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
G [auth J]IPR001921Large ribosomal subunit protein eL8, eukaryotaFamily
F [auth I]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
F [auth I]IPR005998Large ribosomal subunit protein uL30, eukaryotaFamily
F [auth I]IPR039699Large ribosomal subunit protein uL30Family
F [auth I]IPR035808Large ribosomal subunit protein uL30, eukaryota/archaeaDomain
F [auth I]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotaDomain
F [auth I]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
F [auth I]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
E [auth H]IPR005568Large ribosomal subunit protein uL6, N-terminalDomain
E [auth H]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
E [auth H]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
E [auth H]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
E [auth H]IPR000915Large ribosomal subunit protein eL6Family
OA [auth r]IPR029004Ribosomal eL28/Mak16Domain
OA [auth r]IPR002672Large ribosomal subunit protein eL28Family
NA [auth q]IPR002674Large ribosomal subunit protein eL43Family
NA [auth q]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
NA [auth q]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
D [auth G]IPR057268Large ribosomal subunit protein uL18Family
D [auth G]IPR005485Large ribosomal subunit protein uL18, eukaryota/archaeaFamily
D [auth G]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
MA [auth p]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
MA [auth p]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
MA [auth p]IPR000552Large ribosomal subunit protein eL42Family
LA [auth o]IPR019954Ubiquitin conserved siteConserved Site
LA [auth o]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
LA [auth o]IPR000626Ubiquitin-like domainDomain
LA [auth o]IPR019956Ubiquitin domainDomain
LA [auth o]IPR050158Ubiquitin and ubiquitin-likeFamily
LA [auth o]IPR001975Large ribosomal subunit protein eL40 domainDomain
LA [auth o]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
LA [auth o]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
KA [auth n]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
KA [auth n]IPR000077Large ribosomal subunit protein eL39Family
KA [auth n]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
JA [auth m]IPR002675Large ribosomal subunit protein eL38Family
JA [auth m]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
IA [auth l]IPR001569Large ribosomal subunit protein eL37Family
IA [auth l]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
IA [auth l]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
IA [auth l]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
HA [auth k]IPR000509Large ribosomal subunit protein eL36Family
HA [auth k]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
GA [auth j]IPR001854Large ribosomal subunit protein uL29Family
GA [auth j]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
GA [auth j]IPR045059Large ribosomal subunit protein uL29, eukaryotaFamily
FA [auth i]IPR008195Large ribosomal subunit protein eL34Family
FA [auth i]IPR038562Large ribosomal subunit protein eL34, C-terminal domain superfamilyHomologous Superfamily
FA [auth i]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
EA [auth h]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
EA [auth h]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
EA [auth h]IPR001780Large ribosomal subunit protein eL33Family
EA [auth h]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
DA [auth g]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
DA [auth g]IPR001515Large ribosomal subunit protein eL32Family
DA [auth g]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
C [auth E]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
C [auth E]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
C [auth E]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
C [auth E]IPR000597Large ribosomal subunit protein uL3Family
C [auth E]IPR045077Large ribosomal subunit protein uL3, archaea/eukaryotaFamily
CA [auth f]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
CA [auth f]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
CA [auth f]IPR000054Large ribosomal subunit protein eL31Family
BA [auth e]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
BA [auth e]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
BA [auth e]IPR000231Large ribosomal subunit protein eL30Family
BA [auth e]IPR039109Large ribosomal subunit protein eL30-likeFamily
BA [auth e]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
AA [auth d]IPR002673Large ribosomal subunit protein eL29Family
Z [auth c]IPR021131Large ribosomal subunit protein uL15/eL18Domain
Z [auth c]IPR030878Large ribosomal subunit protein uL15Family
Z [auth c]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
Z [auth c]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
Y [auth b]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
Y [auth b]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
Y [auth b]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Y [auth b]IPR001141Large ribosomal subunit protein eL27Family
Y [auth b]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
X [auth a]IPR005756Large ribosomal subunit protein uL24, eukaryota_archaeaFamily
X [auth a]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
X [auth a]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
X [auth a]IPR005824KOWDomain
X [auth a]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
X [auth a]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
W [auth Z]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
W [auth Z]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
W [auth Z]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
W [auth Z]IPR019985Large ribosomal subunit protein uL23Family
W [auth Z]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
W [auth Z]IPR013025Large ribosomal subunit protein uL23-likeFamily
V [auth Y]IPR011017TRASH domainDomain
V [auth Y]IPR056366Large ribosomal subunit protein eL24Family
V [auth Y]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
V [auth Y]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
V [auth Y]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
U [auth X]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
U [auth X]IPR000218Large ribosomal subunit protein uL14Family
U [auth X]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
T [auth W]IPR002671Large ribosomal subunit protein eL22Family
T [auth W]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
B [auth F]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
B [auth F]IPR002136Large ribosomal subunit protein uL4Family
B [auth F]IPR013000Large ribosomal subunit protein uL4, eukaryota/archaea, conserved siteConserved Site
B [auth F]IPR045240Large ribosomal subunit protein uL4, eukaryota/archaeaFamily
B [auth F]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
S [auth V]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
S [auth V]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
S [auth V]IPR001147Large ribosomal subunit protein eL21Family
S [auth V]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
R [auth U]IPR028877Large ribosomal subunit protein eL20Family
R [auth U]IPR023573Large ribosomal subunit protein eL20 domainDomain
R [auth U]IPR021138Large ribosomal subunit protein eL20, eukaryotaFamily
Q [auth T]IPR039547Large ribosomal subunit protein eL19Family
Q [auth T]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
Q [auth T]IPR057260Ribosomal protein L19e, C-terminal domainDomain
Q [auth T]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
Q [auth T]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
Q [auth T]IPR057259Ribosomal protein L19e, N-terminal domainDomain
Q [auth T]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
Q [auth T]IPR000196Large ribosomal subunit protein eL19 domainDomain
P [auth S]IPR021131Large ribosomal subunit protein uL15/eL18Domain
P [auth S]IPR000039Large ribosomal subunit protein eL18Family
P [auth S]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
O [auth R]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
O [auth R]IPR005721Large ribosomal subunit protein uL22, eukaryota/archaeaFamily
O [auth R]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
O [auth R]IPR001063Large ribosomal subunit protein uL22Family
N [auth Q]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
N [auth Q]IPR005822Large ribosomal subunit protein uL13Family
N [auth Q]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
N [auth Q]IPR005755Large ribosomal subunit protein uL13, eukaryota/archaeaFamily
M [auth P]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
M [auth P]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
M [auth P]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
M [auth P]IPR000439Large ribosomal subunit protein eL15Family
L [auth O]IPR039660Large ribosomal subunit protein eL14Family
L [auth O]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
L [auth O]IPR002784Large ribosomal subunit protein eL14 domainDomain
L [auth O]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
K [auth N]IPR001380Large ribosomal subunit protein eL13Family
K [auth N]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
J [auth M]IPR057266Large ribosomal subunit protein uL5, eukaryota/archaeaFamily
J [auth M]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
J [auth M]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
J [auth M]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
J [auth M]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
J [auth M]IPR002132Large ribosomal subunit protein uL5Family
A [auth D]IPR023672Large ribosomal subunit protein uL2, archaea/eukaryotaFamily
A [auth D]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
A [auth D]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
A [auth D]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
A [auth D]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
A [auth D]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
A [auth D]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
A [auth D]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
A [auth D]IPR002171Large ribosomal subunit protein uL2Family

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
SA [auth 8]A2M Parent Component: A

SA [auth 8]OMG Parent Component: G

SA [auth 8]PSU Parent Component: U

QA [auth 2]1MA Parent Component: A

QA [auth 2]5MC Parent Component: C

QA [auth 2]A2M Parent Component: A

QA [auth 2]OMC Parent Component: C

QA [auth 2]OMG Parent Component: G

QA [auth 2]OMU Parent Component: U

QA [auth 2]PSU Parent Component: U

QA [auth 2]UR3 Parent Component: U

OA [auth r]THC Parent Component: THR

C [auth E]HIC Parent Component: HIS

RESIDAA0317

PSI-MOD :  1'-methyl-L-histidine MOD:00322