7SJ9 | pdb_00007sj9

13pf E254A microtubule from recombinant human tubulin decorated with EB3


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
NSCOP2B SuperfamilyCalponin-homology domain, CH-domain 8051974 3000264 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyCalponin-homology domain, CH-domain 8051974 3000264 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
NCHe7sj9N1 A: alpha bundlesX: CH domain-likeH: Calponin-homology domain-like (From Topology)T: Calponin-homology domain-likeF: CHECOD (1.6)
MCHe7sj9M1 A: alpha bundlesX: CH domain-likeH: Calponin-homology domain-like (From Topology)T: Calponin-homology domain-likeF: CHECOD (1.6)
GTubulin_Ce7sj9G1 A: a+b three layersX: Bacillus chorismate mutase-likeH: Tubulin C-terminal domain-like (From Topology)T: Tubulin C-terminal domain-likeF: Tubulin_CECOD (1.6)
GTubuline7sj9G2 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Tubulin nucleotide-binding domain-likeF: TubulinECOD (1.6)
ITubulin_Ce7sj9I2 A: a+b three layersX: Bacillus chorismate mutase-likeH: Tubulin C-terminal domain-like (From Topology)T: Tubulin C-terminal domain-likeF: Tubulin_CECOD (1.6)
ITubuline7sj9I1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Tubulin nucleotide-binding domain-likeF: TubulinECOD (1.6)
HTubulin_Ce7sj9H1 A: a+b three layersX: Bacillus chorismate mutase-likeH: Tubulin C-terminal domain-like (From Topology)T: Tubulin C-terminal domain-likeF: Tubulin_CECOD (1.6)
HTubuline7sj9H2 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Tubulin nucleotide-binding domain-likeF: TubulinECOD (1.6)
FTubulin_Ce7sj9F2 A: a+b three layersX: Bacillus chorismate mutase-likeH: Tubulin C-terminal domain-like (From Topology)T: Tubulin C-terminal domain-likeF: Tubulin_CECOD (1.6)
FTubuline7sj9F1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Tubulin nucleotide-binding domain-likeF: TubulinECOD (1.6)
DTubulin_Ce7sj9D1 A: a+b three layersX: Bacillus chorismate mutase-likeH: Tubulin C-terminal domain-like (From Topology)T: Tubulin C-terminal domain-likeF: Tubulin_CECOD (1.6)
DTubuline7sj9D2 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Tubulin nucleotide-binding domain-likeF: TubulinECOD (1.6)
BTubulin_Ce7sj9B2 A: a+b three layersX: Bacillus chorismate mutase-likeH: Tubulin C-terminal domain-like (From Topology)T: Tubulin C-terminal domain-likeF: Tubulin_CECOD (1.6)
BTubuline7sj9B1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Tubulin nucleotide-binding domain-likeF: TubulinECOD (1.6)
KTubulin_Ce7sj9K1 A: a+b three layersX: Bacillus chorismate mutase-likeH: Tubulin C-terminal domain-like (From Topology)T: Tubulin C-terminal domain-likeF: Tubulin_CECOD (1.6)
KTubuline7sj9K2 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Tubulin nucleotide-binding domain-likeF: TubulinECOD (1.6)
LTubulin_Ce7sj9L1 A: a+b three layersX: Bacillus chorismate mutase-likeH: Tubulin C-terminal domain-like (From Topology)T: Tubulin C-terminal domain-likeF: Tubulin_CECOD (1.6)
LTubuline7sj9L2 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Tubulin nucleotide-binding domain-likeF: TubulinECOD (1.6)
JTubulin_Ce7sj9J1 A: a+b three layersX: Bacillus chorismate mutase-likeH: Tubulin C-terminal domain-like (From Topology)T: Tubulin C-terminal domain-likeF: Tubulin_CECOD (1.6)
JTubuline7sj9J2 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Tubulin nucleotide-binding domain-likeF: TubulinECOD (1.6)
ETubulin_Ce7sj9E1 A: a+b three layersX: Bacillus chorismate mutase-likeH: Tubulin C-terminal domain-like (From Topology)T: Tubulin C-terminal domain-likeF: Tubulin_CECOD (1.6)
ETubuline7sj9E2 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Tubulin nucleotide-binding domain-likeF: TubulinECOD (1.6)
CTubulin_Ce7sj9C1 A: a+b three layersX: Bacillus chorismate mutase-likeH: Tubulin C-terminal domain-like (From Topology)T: Tubulin C-terminal domain-likeF: Tubulin_CECOD (1.6)
CTubuline7sj9C2 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Tubulin nucleotide-binding domain-likeF: TubulinECOD (1.6)
ATubulin_Ce7sj9A1 A: a+b three layersX: Bacillus chorismate mutase-likeH: Tubulin C-terminal domain-like (From Topology)T: Tubulin C-terminal domain-likeF: Tubulin_CECOD (1.6)
ATubuline7sj9A2 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Tubulin nucleotide-binding domain-likeF: TubulinECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
G3.40.50.1440 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Tubulin/FtsZ, GTPase domainCATH (utative)
G3.30.1330.20 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: ACATH (utative)
G1.10.287.600 Mainly Alpha Orthogonal Bundle Helix Hairpins Helix hairpin binCATH (utative)
I3.40.50.1440 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Tubulin/FtsZ, GTPase domainCATH (utative)
I3.30.1330.20 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: ACATH (utative)
I1.10.287.600 Mainly Alpha Orthogonal Bundle Helix Hairpins Helix hairpin binCATH (utative)
H3.40.50.1440 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Tubulin/FtsZ, GTPase domainCATH (utative)
H3.30.1330.20 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: ACATH (utative)
H1.10.287.600 Mainly Alpha Orthogonal Bundle Helix Hairpins Helix hairpin binCATH (utative)
F3.40.50.1440 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Tubulin/FtsZ, GTPase domainCATH (utative)
F3.30.1330.20 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: ACATH (utative)
F1.10.287.600 Mainly Alpha Orthogonal Bundle Helix Hairpins Helix hairpin binCATH (utative)
D3.40.50.1440 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Tubulin/FtsZ, GTPase domainCATH (utative)
D3.30.1330.20 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: ACATH (utative)
D1.10.287.600 Mainly Alpha Orthogonal Bundle Helix Hairpins Helix hairpin binCATH (utative)
B3.40.50.1440 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Tubulin/FtsZ, GTPase domainCATH (utative)
B3.30.1330.20 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: ACATH (utative)
B1.10.287.600 Mainly Alpha Orthogonal Bundle Helix Hairpins Helix hairpin binCATH (utative)
K3.40.50.1440 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Tubulin/FtsZ, GTPase domainCATH (utative)
K3.30.1330.20 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: ACATH (utative)
L3.40.50.1440 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Tubulin/FtsZ, GTPase domainCATH (utative)
L3.30.1330.20 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: ACATH (utative)
J3.40.50.1440 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Tubulin/FtsZ, GTPase domainCATH (utative)
J3.30.1330.20 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: ACATH (utative)
E3.40.50.1440 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Tubulin/FtsZ, GTPase domainCATH (utative)
E3.30.1330.20 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: ACATH (utative)
C3.40.50.1440 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Tubulin/FtsZ, GTPase domainCATH (utative)
C3.30.1330.20 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: ACATH (utative)
A3.40.50.1440 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Tubulin/FtsZ, GTPase domainCATH (utative)
A3.30.1330.20 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: ACATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
M, N
PF00307Calponin homology (CH) domain (CH)Calponin homology (CH) domainThe CH domain is found in both cytoskeletal proteins and signal transduction proteins [1]. The CH domain is involved in actin binding in some members of the family. However in calponins there is evidence that the CH domain is not involved in its ac ...The CH domain is found in both cytoskeletal proteins and signal transduction proteins [1]. The CH domain is involved in actin binding in some members of the family. However in calponins there is evidence that the CH domain is not involved in its actin binding activity [4]. Most member proteins have from two to four copies of the CH domain, however some proteins such as calponin and Swiss:P15498 have only a single copy.
Domain
B, D, F, G, H
PF00091Tubulin/FtsZ family, GTPase domain (Tubulin)Tubulin/FtsZ family, GTPase domainThis family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ...This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules.
Domain
B, D, F, G, H
PF03953Tubulin C-terminal domain (Tubulin_C)Tubulin C-terminal domainThis family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tub ...This family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules. (The FtsZ GTPases have been split into their won family).
Domain
A, C, E, J, K
PF00091Tubulin/FtsZ family, GTPase domain (Tubulin)Tubulin/FtsZ family, GTPase domainThis family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ...This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules.
Domain
A, C, E, J, K
PF03953Tubulin C-terminal domain (Tubulin_C)Tubulin C-terminal domainThis family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tub ...This family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules. (The FtsZ GTPases have been split into their won family).
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
M, N
Microtubule-associated protein RP/EB family member 3
B, D, F, G, H
Tubulin beta-3 chain
A, C, E, J, K
Tubulin alpha-1B chain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
M, N
IPR001715Calponin homology domainDomain
M, N
IPR004953EB1, C-terminalDomain
M, N
IPR027328Microtubule-associated protein RP/EBFamily
M, N
IPR036133EB1, C-terminal domain superfamilyHomologous Superfamily
M, N
IPR036872CH domain superfamilyHomologous Superfamily
B, D, F, G, H
IPR008280Tubulin/FtsZ, C-terminalHomologous Superfamily
B, D, F, G, H
IPR017975Tubulin, conserved siteConserved Site
B, D, F, G, H
IPR023123Tubulin, C-terminalHomologous Superfamily
B, D, F, G, H
IPR002453Beta tubulinFamily
B, D, F, G, H
IPR013838Beta tubulin, autoregulation binding siteBinding Site
B, D, F, G, H
IPR018316Tubulin/FtsZ, 2-layer sandwich domainDomain
B, D, F, G, H
IPR003008Tubulin/FtsZ, GTPase domainDomain
B, D, F, G, H
IPR037103Tubulin/FtsZ-like, C-terminal domainHomologous Superfamily
B, D, F, G, H
IPR000217TubulinFamily
B, D, F, G, H
IPR036525Tubulin/FtsZ, GTPase domain superfamilyHomologous Superfamily
A, C, E, J, K
IPR008280Tubulin/FtsZ, C-terminalHomologous Superfamily
A, C, E, J, K
IPR017975Tubulin, conserved siteConserved Site
A, C, E, J, K
IPR023123Tubulin, C-terminalHomologous Superfamily
A, C, E, J, K
IPR018316Tubulin/FtsZ, 2-layer sandwich domainDomain
A, C, E, J, K
IPR003008Tubulin/FtsZ, GTPase domainDomain
A, C, E, J, K
IPR037103Tubulin/FtsZ-like, C-terminal domainHomologous Superfamily
A, C, E, J, K
IPR002452Alpha tubulinFamily
A, C, E, J, K
IPR000217TubulinFamily
A, C, E, J, K
IPR036525Tubulin/FtsZ, GTPase domain superfamilyHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
M, N
PharosQ9UPY8
B, D, F, G, H
PharosQ13509
A, C, E, J, K
PharosP68363