ALTERNATIVE MODELING OF TROPOMYOSIN IN HUMAN CARDIAC THIN FILAMENT IN THE CALCIUM FREE STATE
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| H | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| H | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| J | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| J | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| K | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| K | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| L | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| L | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| M | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| M | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| N | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| N | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| O | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| O | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| P | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| P | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| Q | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| Q | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| R | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| R | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| AA [auth i] | SCOP2B Superfamily | Tropomyosin | 8101501 | 3001691 | SCOP2B (2022-06-29) |
| BA [auth j] | SCOP2B Superfamily | Tropomyosin | 8101501 | 3001691 | SCOP2B (2022-06-29) |
| S [auth a] | SCOP2B Superfamily | Tropomyosin | 8101501 | 3001691 | SCOP2B (2022-06-29) |
| T [auth b] | SCOP2B Superfamily | Tropomyosin | 8101501 | 3001691 | SCOP2B (2022-06-29) |
| FA [auth f] | SCOP2B Superfamily | Troponin coil-coiled subunits | 8032250 | 3001782 | SCOP2B (2022-06-29) |
| X [auth Y] | SCOP2B Superfamily | Troponin coil-coiled subunits | 8032250 | 3001782 | SCOP2B (2022-06-29) |
| GA [auth c] | SCOP2B Superfamily | Troponin coil-coiled subunits | 8032252 | 3001782 | SCOP2B (2022-06-29) |
| Y [auth V] | SCOP2B Superfamily | Troponin coil-coiled subunits | 8032252 | 3001782 | SCOP2B (2022-06-29) |
| HA [auth d] | SCOP2B Superfamily | EF-hand | 8033359 | 3001983 | SCOP2B (2022-06-29) |
| Z [auth U] | SCOP2B Superfamily | EF-hand | 8033359 | 3001983 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Actin_1st | e7utlA1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| A | Actin_2nd | e7utlA2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| B | Actin_1st | e7utlB2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| B | Actin_2nd | e7utlB1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| C | Actin_1st | e7utlC2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| C | Actin_2nd | e7utlC1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| D | Actin_1st | e7utlD1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| D | Actin_2nd | e7utlD2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| E | Actin_1st | e7utlE1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| E | Actin_2nd | e7utlE2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| F | Actin_1st | e7utlF1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| F | Actin_2nd | e7utlF2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| G | Actin_1st | e7utlG1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| G | Actin_2nd | e7utlG2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| H | Actin_1st | e7utlH1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| H | Actin_2nd | e7utlH2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| I | Actin_1st | e7utlI2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| I | Actin_2nd | e7utlI1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| J | Actin_1st | e7utlJ2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| J | Actin_2nd | e7utlJ1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| K | Actin_1st | e7utlK1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| K | Actin_2nd | e7utlK2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| L | Actin_1st | e7utlL2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| L | Actin_2nd | e7utlL1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| M | Actin_1st | e7utlM2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| M | Actin_2nd | e7utlM1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| N | Actin_1st | e7utlN1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| N | Actin_2nd | e7utlN2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| O | Actin_1st | e7utlO2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| O | Actin_2nd | e7utlO1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| P | Actin_1st | e7utlP1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| P | Actin_2nd | e7utlP2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| Q | Actin_1st | e7utlQ2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| Q | Actin_2nd | e7utlQ1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| R | Actin_1st | e7utlR2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| R | Actin_2nd | e7utlR1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| AA [auth i] | Tropomyosin | e7utli1 | A: alpha bundles | X: Helical domain in structural maintenance of chromosomes protein 3 (From Topology) | H: Helical domain in structural maintenance of chromosomes protein 3 (From Topology) | T: Helical domain in structural maintenance of chromosomes protein 3 | F: Tropomyosin | ECOD (1.6) |
| BA [auth j] | Tropomyosin | e7utlj1 | A: alpha bundles | X: Helical domain in structural maintenance of chromosomes protein 3 (From Topology) | H: Helical domain in structural maintenance of chromosomes protein 3 (From Topology) | T: Helical domain in structural maintenance of chromosomes protein 3 | F: Tropomyosin | ECOD (1.6) |
| S [auth a] | Tropomyosin | e7utla1 | A: alpha bundles | X: Helical domain in structural maintenance of chromosomes protein 3 (From Topology) | H: Helical domain in structural maintenance of chromosomes protein 3 (From Topology) | T: Helical domain in structural maintenance of chromosomes protein 3 | F: Tropomyosin | ECOD (1.6) |
| T [auth b] | Tropomyosin | e7utlb1 | A: alpha bundles | X: Helical domain in structural maintenance of chromosomes protein 3 (From Topology) | H: Helical domain in structural maintenance of chromosomes protein 3 (From Topology) | T: Helical domain in structural maintenance of chromosomes protein 3 | F: Tropomyosin | ECOD (1.6) |
| U [auth W] | Tropomyosin | e7utlW1 | A: alpha duplicates or obligate multimers | X: EB1 dimerisation domain-like (From Topology) | H: EB1 dimerisation domain-like (From Topology) | T: EB1 dimerisation domain-like | F: Tropomyosin | ECOD (1.6) |
| V [auth Z] | Tropomyosin | e7utlZ1 | A: alpha duplicates or obligate multimers | X: EB1 dimerisation domain-like (From Topology) | H: EB1 dimerisation domain-like (From Topology) | T: EB1 dimerisation domain-like | F: Tropomyosin | ECOD (1.6) |
| HA [auth d] | EF-hand_7_1 | e7utld1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_1 | ECOD (1.6) |
| HA [auth d] | EF-hand_7_5 | e7utld2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_5 | ECOD (1.6) |
| Z [auth U] | EF-hand_7_1 | e7utlU2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_1 | ECOD (1.6) |
| Z [auth U] | EF-hand_7_5 | e7utlU1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_5 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF13833 | EF-hand domain pair (EF-hand_8) | EF-hand domain pair | Domain | ||
| PF00261 | Tropomyosin (Tropomyosin) | Tropomyosin | - | Coiled-coil | |
| PF00022 | Actin (Actin) | Actin | - | Family | |
| PF13499 | EF-hand domain pair (EF-hand_7) | EF-hand domain pair | Domain | ||
| PF00992 | Troponin (Troponin) | Troponin | - | Family | |
| PF00261 | Tropomyosin (Tropomyosin) | Tropomyosin | - | Coiled-coil | |
| EA [auth e], FA [auth f], W [auth X], X [auth Y] | PF00992 | Troponin (Troponin) | Troponin | - | Family |
| GA [auth c], Y [auth V] | PF00992 | Troponin (Troponin) | Troponin | - | Family |
| HA [auth d], Z [auth U] | PF13833 | EF-hand domain pair (EF-hand_8) | EF-hand domain pair | Domain | |
| HA [auth d], Z [auth U] | PF13499 | EF-hand domain pair (EF-hand_7) | EF-hand domain pair | Domain |














