7WTT | pdb_00007wtt

Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A1 (with CK1)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
H [auth F]SCOP2B SuperfamilyRibosomal protein S7 8066003 3000799 SCOP2B (2022-06-29)
F [auth E]SCOP2B SuperfamilyNucleic acid-binding proteins 8052756 3000135 SCOP2B (2022-06-29)
F [auth E]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8052755 3001473 SCOP2B (2022-06-29)
F [auth E]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8052757 3000334 SCOP2B (2022-06-29)
E [auth c]SCOP2B SuperfamilyNucleic acid-binding proteins 8063426 3000135 SCOP2B (2022-06-29)
D [auth B]SCOP2B SuperfamilyRibosomal S3Ae-like 8053212 3002166 SCOP2B (2022-06-29)
GA [auth a]SCOP2B SuperfamilyProtein kinase-like (PK-like) 8080853 3000066 SCOP2B (2022-06-29)
EA [auth M]SCOP2B SuperfamilyL30e-like 8063978 3001739 SCOP2B (2022-06-29)
AA [auth I]SCOP2B Superfamily50S Ribosomal protein L14-like 8053077 3000433 SCOP2B (2022-06-29)
Y [auth L]SCOP2B SuperfamilyNucleic acid-binding proteins 8052717 3000135 SCOP2B (2022-06-29)
Y [auth L]SCOP2B SuperfamilyRibosomal S17 N-terminal domain-like 8052715 3002138 SCOP2B (2022-06-29)
X [auth N]SCOP2B SuperfamilyHomeodomain-like 8052958 3000001 SCOP2B (2022-06-29)
X [auth N]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8052959 3001284 SCOP2B (2022-06-29)
W [auth O]SCOP2B SuperfamilyTranslational machinery components 8098844 3000571 SCOP2B (2022-06-29)
U [auth Q]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8082685 3000100 SCOP2B (2022-06-29)
T [auth S]SCOP2B SuperfamilyS13-like H2TH domain 8101555 3000053 SCOP2B (2022-06-29)
S [auth T]SCOP2B SuperfamilyWinged helix DNA-binding domain 8089318 3000034 SCOP2B (2022-06-29)
P [auth W]SCOP2B SuperfamilyRibosomal protein S8 8095469 3000709 SCOP2B (2022-06-29)
K [auth Z]SCOP2B SuperfamilyWinged helix DNA-binding domain 8090992 3000034 SCOP2B (2022-06-29)
J [auth G]SCOP2B SuperfamilyGS N-terminal domain-like 8053171 3000408 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
I [auth H]Ribosomal_S7e_Ne7wttH2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_NECOD (1.6)
I [auth H]Ribosomal_S7e_C_1e7wttH1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_C_1ECOD (1.6)
H [auth F]Ribosomal_S7_1e7wttF1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
G [auth e]Ribosomal_S30e7wtte1 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: Ribosomal_S30ECOD (1.6)
F [auth E]Ribosomal_S4ee7wttE1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S4eECOD (1.6)
F [auth E]40S_S4_Ce7wttE3 A: beta barrelsX: SH3H: SH3T: SH3F: 40S_S4_CECOD (1.6)
F [auth E]RS4NTe7wttE2 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: RS4NTECOD (1.6)
E [auth c]Ribosomal_S28ee7wttc1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S28eECOD (1.6)
D [auth B]Ribosomal_S3Ae_Ne7wttB2 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: Ribosomal_S3Ae_NECOD (1.6)
D [auth B]Ribosomal_S3Ae_Ce7wttB1 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: Ribosomal_S3Ae_CECOD (1.6)
GA [auth a]Pkinase_Tyre7wtta1 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: Protein kinaseF: Pkinase_TyrECOD (1.6)
FA [auth f]Ribosomal_S27e7wttf1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27ECOD (1.6)
EA [auth M]Ribosomal_L7Aee7wttM1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
C [auth b]Ribosomal_S27ee7wttb1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27eECOD (1.6)
BA [auth r]Trm112pe7wttr1 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: Trm112pECOD (1.6)
AA [auth I]Ribosomal_S8ee7wttI1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_S8eECOD (1.6)
Z [auth J]S4e7wttJ1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
Y [auth L]Ribosomal_S17_1e7wttL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
X [auth N]Ribosomal_S13_Ne7wttN1 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: Ribosomal_S13_NECOD (1.6)
X [auth N]Ribosomal_S15_2e7wttN2 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_2ECOD (1.6)
W [auth O]Ribosomal_S11e7wttO1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
V [auth P]Ribosomal_S19e7wttP1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
U [auth Q]Ribosomal_S9e7wttQ1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
T [auth S]Ribosomal_S13e7wttS1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13ECOD (1.6)
B [auth R]Ribosomal_S17ee7wttR1 A: alpha arraysX: HTHH: HTHT: FF domainF: Ribosomal_S17eECOD (1.6)
S [auth T]Ribosomal_S19ee7wttT1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S19eECOD (1.6)
P [auth W]Ribosomal_S8_N_1e7wttW2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_N_1ECOD (1.6)
P [auth W]Ribosomal_S8_C_1e7wttW1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_C_1ECOD (1.6)
N [auth X]Ribosom_S12_S23e7wttX1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
M [auth x]KH_1e7wttx2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Eukaryotic type KH-domain (KH-domain type I)F: KH_1ECOD (1.6)
M [auth x]KOG3273e7wttx1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Eukaryotic type KH-domain (KH-domain type I)F: KOG3273ECOD (1.6)
L [auth Y]Ribosomal_S24ee7wttY1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_S24eECOD (1.6)
K [auth Z]Ribosomal_S25e7wttZ1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S25ECOD (1.6)
J [auth G]Ribosomal_S6ee7wttG1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_S6eECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
H [auth F]1.10.455.10 Mainly Alpha Orthogonal Bundle Ribosomal Protein S7 Ribosomal protein S7/S5CATH (utative)
T [auth S]1.10.8.50 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (utative)
L [auth Y]3.30.70.3370 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
H [auth F]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. Domain
H [auth F]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
F [auth E]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
F [auth E]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
F [auth E]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1]. Domain
F [auth E]PF00467KOW motif (KOW)KOW motif- Family
D [auth B]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
EA [auth M]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
DA [auth K]PF08161Ribosomal RNA-processing protein 12, HEAT repeats (RRP12_HEAT)Ribosomal RNA-processing protein 12, HEAT repeats- Repeat
AA [auth I]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
Z [auth J]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
Z [auth J]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
Y [auth L]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
Y [auth L]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
X [auth N]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
W [auth O]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
V [auth P]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
U [auth Q]PF08241Methyltransferase domain (Methyltransf_11)Methyltransferase domainMembers of this family are SAM dependent methyltransferases. Domain
U [auth Q]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
T [auth S]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
B [auth R]PF03966Trm112p-like protein (Trm112p)Trm112p-like proteinThe function of this family is uncertain. The bacterial members are about 60-70 amino acids in length and the eukaryotic examples are about 120 amino acids in length. The C terminus contains the strongest conservation. Trm112p is required for tRNA ...The function of this family is uncertain. The bacterial members are about 60-70 amino acids in length and the eukaryotic examples are about 120 amino acids in length. The C terminus contains the strongest conservation. Trm112p is required for tRNA methylation in S. cerevisiae and is found in complexes with 2 tRNA methylases (TRM9 and TRM11) also with putative methyltransferase YDR140W [1]. The zinc-finger protein Ynr046w is plurifunctional and a component of the eRF1 methyltransferase in yeast [2]. The crystal structure of Ynr046w has been determined to 1.7 A resolution. It comprises a zinc-binding domain built from both the N- and C-terminal sequences and an inserted domain, absent from bacterial and archaeal orthologs of the protein, composed of three alpha-helices [2].
Domain
S [auth T]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
P [auth W]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
N [auth X]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
L [auth Y]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
J [auth G]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth H]40S ribosomal protein S7
H [auth F]40S ribosomal protein S5
G [auth e]40S ribosomal protein S30
F [auth E]40S ribosomal protein S4, X isoform
E [auth c]40S ribosomal protein S28
D [auth B]40S ribosomal protein S3a
HA [auth z]Ribosome biogenesis protein SLX9 homolog-
GA [auth a]Casein kinase I isoform alpha
FA [auth f]Ubiquitin-40S ribosomal protein S27a
EA [auth M]40S ribosomal protein S12
DA [auth K]RRP12-like protein -
C [auth b]40S ribosomal protein S27
CA [auth q]Probable 18S rRNA (guanine-N(7))-methyltransferase
BA [auth r]Multifunctional methyltransferase subunit TRM112-like protein
AA [auth I]40S ribosomal protein S8
Z [auth J]40S ribosomal protein S9
Y [auth L]40S ribosomal protein S11
X [auth N]40S ribosomal protein S13
W [auth O]40S ribosomal protein S14
V [auth P]40S ribosomal protein S15
U [auth Q]40S ribosomal protein S16
T [auth S]40S ribosomal protein S18
B [auth R]40S ribosomal protein S17
S [auth T]40S ribosomal protein S19
R [auth t]Protein LTV1 homolog-
Q [auth u]Pre-rRNA-processing protein TSR1 homolog
P [auth W]40S ribosomal protein S15a
O [auth w]Bystin
N [auth X]40S ribosomal protein S23
M [auth x]RNA-binding protein PNO1
L [auth Y]40S ribosomal protein S24
K [auth Z]40S ribosomal protein S25
J [auth G]40S ribosomal protein S6
A [auth 2]18S rRNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth H]IPR000554Small ribosomal subunit protein eS7Family
I [auth H]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
H [auth F]IPR023798Small ribosomal subunit protein uS7 domainDomain
H [auth F]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
H [auth F]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
H [auth F]IPR000235Small ribosomal subunit protein uS7Family
H [auth F]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
G [auth e]IPR019954Ubiquitin conserved siteConserved Site
G [auth e]IPR006846Small ribosomal subunit protein eS30Family
G [auth e]IPR039415Ubiquitin-like protein FUBIDomain
G [auth e]IPR000626Ubiquitin-like domainDomain
G [auth e]IPR019956Ubiquitin domainDomain
G [auth e]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
F [auth E]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
F [auth E]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
F [auth E]IPR013845Small ribosomal subunit protein eS4, central regionDomain
F [auth E]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
F [auth E]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
F [auth E]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
F [auth E]IPR002942RNA-binding S4 domainDomain
F [auth E]IPR000876Small ribosomal subunit protein eS4Family
F [auth E]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
F [auth E]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
F [auth E]IPR005824KOWDomain
E [auth c]IPR028626Ribosomal protein eS28 conserved siteConserved Site
E [auth c]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
E [auth c]IPR000289Small ribosomal subunit protein eS28Family
D [auth B]IPR001593Small ribosomal subunit protein eS1Family
D [auth B]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
D [auth B]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily
HA [auth z]IPR028160Ribosome biogenesis protein Slx9-likeFamily
GA [auth a]IPR017441Protein kinase, ATP binding siteBinding Site
GA [auth a]IPR000719Protein kinase domainDomain
GA [auth a]IPR050235Casein Kinase 1 Ser/Thr Protein KinaseFamily
GA [auth a]IPR011009Protein kinase-like domain superfamilyHomologous Superfamily
GA [auth a]IPR008271Serine/threonine-protein kinase, active siteActive Site
FA [auth f]IPR019954Ubiquitin conserved siteConserved Site
FA [auth f]IPR050158Ubiquitin and ubiquitin-likeFamily
FA [auth f]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
FA [auth f]IPR000626Ubiquitin-like domainDomain
FA [auth f]IPR038582Small ribosomal subunit protein eS31 eukaryotic-type superfamilyHomologous Superfamily
FA [auth f]IPR002906Small ribosomal subunit protein eS31Domain
FA [auth f]IPR019956Ubiquitin domainDomain
FA [auth f]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
EA [auth M]IPR000530Small ribosomal subunit protein eS12Family
EA [auth M]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
EA [auth M]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
EA [auth M]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
DA [auth K]IPR012978RRP12, HEAT domainDomain
DA [auth K]IPR011989Armadillo-like helicalHomologous Superfamily
DA [auth K]IPR016024Armadillo-type foldHomologous Superfamily
DA [auth K]IPR052087Ribosomal RNA-processing protein RRP12Family
C [auth b]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
C [auth b]IPR000592Small ribosomal subunit protein eS27Family
C [auth b]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
CA [auth q]IPR02223818S rRNA (guanine(1575)-N(7))-methyltransferase Bud23, C-terminalDomain
CA [auth q]IPR03976918S rRNA (guanine(1575)-N(7))-methyltransferase Bud23-likeFamily
CA [auth q]IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilyHomologous Superfamily
CA [auth q]IPR013216Methyltransferase type 11Domain
BA [auth r]IPR039127Multifunctional methyltransferase subunit Trm112Family
BA [auth r]IPR005651Trm112-likeFamily
AA [auth I]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotesHomologous Superfamily
AA [auth I]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
AA [auth I]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
AA [auth I]IPR001047Small ribosomal subunit protein eS8Family
Z [auth J]IPR002942RNA-binding S4 domainDomain
Z [auth J]IPR022801Small ribosomal subunit protein uS4Family
Z [auth J]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
Z [auth J]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
Z [auth J]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
Z [auth J]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
Y [auth L]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
Y [auth L]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
Y [auth L]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
Y [auth L]IPR000266Small ribosomal subunit protein uS17Family
Y [auth L]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
X [auth N]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
X [auth N]IPR000589Small ribosomal subunit protein uS15Family
X [auth N]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
X [auth N]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
W [auth O]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
W [auth O]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
W [auth O]IPR001971Small ribosomal subunit protein uS11Family
V [auth P]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
V [auth P]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
V [auth P]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
V [auth P]IPR002222Small ribosomal subunit protein uS19Family
U [auth Q]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
U [auth Q]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
U [auth Q]IPR000754Small ribosomal subunit protein uS9Family
U [auth Q]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
T [auth S]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
T [auth S]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
T [auth S]IPR001892Small ribosomal subunit protein uS13Family
T [auth S]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
B [auth R]IPR001210Small ribosomal subunit protein eS17Family
B [auth R]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
B [auth R]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
S [auth T]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
S [auth T]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
S [auth T]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
S [auth T]IPR001266Small ribosomal subunit protein eS19Family
R [auth t]IPR007307Low temperature viability protein Ltv1Family
Q [auth u]IPR007034Ribosome biogenesis protein BMS1/TSR1, C-terminalDomain
Q [auth u]IPR030387Bms1/Tsr1-type G domainDomain
Q [auth u]IPR039761Ribosome biogenesis protein Bms1/Tsr1Family
Q [auth u]IPR012948AARP2CNDomain
P [auth W]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
P [auth W]IPR000630Small ribosomal subunit protein uS8Family
P [auth W]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
O [auth w]IPR007955BystinFamily
N [auth X]IPR006032Small ribosomal subunit protein uS12Family
N [auth X]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
N [auth X]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
M [auth x]IPR004087K Homology domainDomain
M [auth x]IPR055211PNO1, second type I KH domainDomain
M [auth x]IPR036612K Homology domain, type 1 superfamilyHomologous Superfamily
M [auth x]IPR055212PNO1, first type I KH domainDomain
L [auth Y]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
L [auth Y]IPR001976Small ribosomal subunit protein eS24Family
L [auth Y]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
L [auth Y]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
K [auth Z]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
K [auth Z]IPR004977Small ribosomal subunit protein eS25Family
J [auth G]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
J [auth G]IPR001377Small ribosomal subunit protein eS6Family
J [auth G]IPR014401Small ribosomal subunit protein eS6-likeFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
I [auth H]PharosP62081
H [auth F]PharosP46782
G [auth e]PharosP62861
F [auth E]PharosP62701
E [auth c]PharosP62857
GA [auth a]PharosP48729
FA [auth f]PharosP62979
EA [auth M]PharosP25398
DA [auth K]PharosQ5JTH9
C [auth b]PharosP42677
CA [auth q]PharosO43709
BA [auth r]PharosQ9UI30
AA [auth I]PharosP62241
Z [auth J]PharosP46781
Y [auth L]PharosP62280
X [auth N]PharosP62277
W [auth O]PharosP62263
V [auth P]PharosP62841
U [auth Q]PharosP62249
T [auth S]PharosP62269
B [auth R]PharosP08708
S [auth T]PharosP39019
R [auth t]PharosQ96GA3
Q [auth u]PharosQ2NL82
P [auth W]PharosP62244
O [auth w]PharosQ13895
N [auth X]PharosP62266
M [auth x]PharosQ9NRX1
L [auth Y]PharosP62847
K [auth Z]PharosP62851
J [auth G]PharosP62753