Annotations: 7Y4Q

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D [auth C]	Sema_1	e7y4qC1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: Sema_1	ECOD (1.6)
D [auth C]	PSI_1	e7y4qC2	A: few secondary structure elements	X: Trefoil/Plexin domain-like (From Topology)	H: Trefoil/Plexin domain-like (From Topology)	T: Trefoil/Plexin domain-like	F: PSI_1	ECOD (1.6)
C [auth D]	Sema_1	e7y4qD2	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: Sema_1	ECOD (1.6)
C [auth D]	PSI_1	e7y4qD1	A: few secondary structure elements	X: Trefoil/Plexin domain-like (From Topology)	H: Trefoil/Plexin domain-like (From Topology)	T: Trefoil/Plexin domain-like	F: PSI_1	ECOD (1.6)
A [auth B]	PHD_BAZ1A_like_like	e7y4qB4	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PHD_BAZ1A_like_like	ECOD (1.6)
A [auth B]	Sema_2	e7y4qB3	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: Sema_2	ECOD (1.6)
A [auth B]	PSI	e7y4qB1	A: few secondary structure elements	X: Trefoil/Plexin domain-like (From Topology)	H: Trefoil/Plexin domain-like (From Topology)	T: Trefoil/Plexin domain-like	F: PSI	ECOD (1.6)
A [auth B]	PSI_3	e7y4qB2	A: few secondary structure elements	X: Trefoil/Plexin domain-like (From Topology)	H: Trefoil/Plexin domain-like (From Topology)	T: Trefoil/Plexin domain-like	F: PSI_3	ECOD (1.6)
B [auth A]	PHD_BAZ1A_like_like	e7y4qA2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PHD_BAZ1A_like_like	ECOD (1.6)
B [auth A]	Sema_2	e7y4qA3	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: Sema_2	ECOD (1.6)
B [auth A]	PSI	e7y4qA1	A: few secondary structure elements	X: Trefoil/Plexin domain-like (From Topology)	H: Trefoil/Plexin domain-like (From Topology)	T: Trefoil/Plexin domain-like	F: PSI	ECOD (1.6)
B [auth A]	PSI_3	e7y4qA4	A: few secondary structure elements	X: Trefoil/Plexin domain-like (From Topology)	H: Trefoil/Plexin domain-like (From Topology)	T: Trefoil/Plexin domain-like	F: PSI_3	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
C [auth D], D [auth C]	PF01437	Plexin repeat (PSI)	Plexin repeat	-	Family
C [auth D], D [auth C]	PF01403	Sema domain (Sema)	Sema domain	-	Repeat
A [auth B], B [auth A]	PF01437	Plexin repeat (PSI)	Plexin repeat	-	Family
A [auth B], B [auth A]	PF01403	Sema domain (Sema)	Sema domain	-	Repeat
A [auth B], B [auth A]	PF17960	TIG domain (TIG_plexin)	TIG domain	This entry represents an TIG or IPT domain (Ig domain shared by Plexins and Transcription factors) found in plexins [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C [auth D], D [auth C]	Semaphorin 6D	protein binding binding molecular function activator activity signaling receptor binding molecular function regulator activity signaling receptor regulator activity receptor ligand activity signaling receptor activator activity semaphorin receptor binding chemorepellent activity	muscle cell migration cell migration cellular process cell motility smooth muscle cell migration cellular response to stimulus regulation of biological process regulation of cellular process cell surface receptor signaling pathway response to stimulus semaphorin-plexin signaling pathway signaling biological regulation cell communication muscle cell migration cell migration cellular process cell motility smooth muscle cell migration cellular response to stimulus regulation of biological process regulation of cellular process cell surface receptor signaling pathway response to stimulus semaphorin-plexin signaling pathway signaling biological regulation cell communication signal transduction negative regulation of locomotion regulation of cell motility regulation of smooth muscle cell migration negative regulation of biological process negative regulation of smooth muscle cell migration regulation of locomotion regulation of cell migration negative regulation of cellular process negative regulation of cell motility locomotion negative regulation of cell migration multicellular organismal process axonogenesis cellular developmental process cell projection organization plasma membrane bounded cell projection morphogenesis cell development neuron projection development cell morphogenesis cellular component organization neurogenesis multicellular organism development cell projection morphogenesis neuron differentiation neuron projection morphogenesis cell differentiation anatomical structure development cellular component organization or biogenesis system development developmental process plasma membrane bounded cell projection organization axon guidance nervous system development axon development cell morphogenesis involved in neuron differentiation generation of neurons anatomical structure morphogenesis neuron projection guidance neuron development positive regulation of locomotion positive regulation of biological process positive regulation of cell migration positive regulation of cell motility positive regulation of cellular process immune response cell activation lymphocyte activation cell activation involved in immune response leukocyte activation immune effector process T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell T cell activation involved in immune response T cell activation immune system process leukocyte activation involved in immune response lymphocyte activation involved in immune response head development animal organ development brain development central nervous system development ventricular system development stem cell development neural crest cell differentiation neural crest cell development mesenchyme development tissue development mesenchymal cell migration stem cell differentiation ameboidal-type cell migration mesenchymal cell differentiation neural crest cell migration positive regulation of smooth muscle cell migration	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure Golgi apparatus organelle cytoplasm intracellular membrane-bounded organelle endomembrane system cell periphery plasma membrane membrane
A [auth B], B [auth A]	Plexin-A1	molecular transducer activity transmembrane signaling receptor activity signaling receptor activity semaphorin receptor activity	multicellular organismal process cellular developmental process developmental growth cell projection organization plasma membrane bounded cell projection morphogenesis cell development neuron projection development cell growth cell morphogenesis cellular component organization neurogenesis multicellular organism development cell projection morphogenesis neuron differentiation neuron projection morphogenesis multicellular organismal process cellular developmental process developmental growth cell projection organization plasma membrane bounded cell projection morphogenesis cell development neuron projection development cell growth cell morphogenesis cellular component organization neurogenesis multicellular organism development cell projection morphogenesis neuron differentiation neuron projection morphogenesis cell differentiation anatomical structure development cellular component organization or biogenesis system development developmental process neuron projection extension plasma membrane bounded cell projection organization developmental cell growth growth nervous system development developmental growth involved in morphogenesis generation of neurons anatomical structure morphogenesis neuron development cellular process regulation of biological process regulation of cell motility regulation of cellular process regulation of locomotion regulation of cell migration biological regulation cell migration cell motility locomotion regulation of smooth muscle cell migration smooth muscle cell migration muscle cell migration neuron projection guidance gonadotrophin-releasing hormone neuronal migration to the hypothalamus hypothalamus development forebrain development central nervous system neuron development central nervous system neuron differentiation hypothalamus cell differentiation hypothalamus gonadotrophin-releasing hormone neuron development limbic system development head development neuron migration forebrain generation of neurons hypothalamus gonadotrophin-releasing hormone neuron differentiation animal organ development brain development diencephalon development forebrain neuron development central nervous system development hypothalamic tangential migration using cell-axon interactions forebrain neuron differentiation hypothalamus cell migration cellular response to stimulus cell surface receptor signaling pathway response to stimulus semaphorin-plexin signaling pathway signaling cell communication signal transduction epithelium development gland development branching involved in salivary gland morphogenesis morphogenesis of an epithelium salivary gland development dichotomous subdivision of terminal units involved in salivary gland branching tissue development tissue morphogenesis gland morphogenesis dichotomous subdivision of an epithelial terminal unit morphogenesis of a branching structure salivary gland morphogenesis animal organ morphogenesis exocrine system development morphogenesis of a branching epithelium olfactory nerve development cranial nerve formation cranial nerve morphogenesis olfactory nerve morphogenesis olfactory nerve formation nerve development cranial nerve development anatomical structure formation involved in morphogenesis cellular component biogenesis cell junction organization cellular component assembly cell junction assembly synapse organization synapse assembly immune response cell activation lymphocyte activation cell activation involved in immune response leukocyte activation immune effector process T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell T cell activation involved in immune response T cell activation immune system process leukocyte activation involved in immune response lymphocyte activation involved in immune response	extracellular exosome membrane-bounded organelle extracellular vesicle cellular anatomical structure extracellular organelle extracellular region organelle extracellular space vesicle extracellular membrane-bounded organelle intracellular anatomical structure cytoplasm cytosol cell periphery extracellular exosome membrane-bounded organelle extracellular vesicle cellular anatomical structure extracellular organelle extracellular region organelle extracellular space vesicle extracellular membrane-bounded organelle intracellular anatomical structure cytoplasm cytosol cell periphery plasma membrane membrane protein-containing complex semaphorin receptor complex receptor complex nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle nucleoplasm organelle lumen nuclear lumen synapse cell junction glutamatergic synapse

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C [auth D], D [auth C]	IPR002165	Plexin repeat	Repeat
C [auth D], D [auth C]	IPR036352	Sema domain superfamily	Homologous Superfamily
C [auth D], D [auth C]	IPR001627	Sema domain	Domain
C [auth D], D [auth C]	IPR027231	Semaphorin	Family
C [auth D], D [auth C]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
A [auth B], B [auth A]	IPR042744	Plexin-A1, Sema domain	Domain
A [auth B], B [auth A]	IPR002909	IPT domain	Domain
A [auth B], B [auth A]	IPR041362	Plexin, TIG domain 2	Domain
A [auth B], B [auth A]	IPR016201	PSI domain	Domain
A [auth B], B [auth A]	IPR014756	Immunoglobulin E-set	Homologous Superfamily
A [auth B], B [auth A]	IPR008936	Rho GTPase activation protein	Homologous Superfamily
A [auth B], B [auth A]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
A [auth B], B [auth A]	IPR002165	Plexin repeat	Repeat
A [auth B], B [auth A]	IPR041019	Plexin, TIG domain 1	Domain
A [auth B], B [auth A]	IPR031148	Plexin family	Family
A [auth B], B [auth A]	IPR046800	Plexin, cytoplasmic RhoGTPase-binding domain	Domain
A [auth B], B [auth A]	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A [auth B], B [auth A]	IPR013548	Plexin, cytoplasmic RasGAP domain	Domain
A [auth B], B [auth A]	IPR036352	Sema domain superfamily	Homologous Superfamily
A [auth B], B [auth A]	IPR001627	Sema domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A [auth B], B [auth A]	Pharos: Q9UIW2	gastric carcinoma malignant mesothelioma pancreatic ductal adenocarcinoma transitional cell carcinoma juvenile dermatomyositis osteosarcoma pancreatic intraductal papillary-mucinous neoplasm ulcerative colitis lung carcinoma ovarian cancer Pick disease