Annotations: 7ZA3

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Glypican_1st	e7za3A1	A: alpha complex topology	X: Glypican insertion domain (From Topology)	H: Glypican insertion domain (From Topology)	T: Glypican insertion domain	F: Glypican_1st	ECOD (1.6)
A	Glypican_2nd	e7za3A2	A: few secondary structure elements	X: Frizzled cysteine-rich domain-related (From Topology)	H: Frizzled cysteine-rich domain-related (From Topology)	T: Frizzled cysteine-rich domain-related	F: Glypican_2nd	ECOD (1.6)
B	Glypican_1st	e7za3B2	A: alpha complex topology	X: Glypican insertion domain (From Topology)	H: Glypican insertion domain (From Topology)	T: Glypican insertion domain	F: Glypican_1st	ECOD (1.6)
B	Glypican_2nd	e7za3B1	A: few secondary structure elements	X: Frizzled cysteine-rich domain-related (From Topology)	H: Frizzled cysteine-rich domain-related (From Topology)	T: Frizzled cysteine-rich domain-related	F: Glypican_2nd	ECOD (1.6)
C	Glypican_1st	e7za3C1	A: alpha complex topology	X: Glypican insertion domain (From Topology)	H: Glypican insertion domain (From Topology)	T: Glypican insertion domain	F: Glypican_1st	ECOD (1.6)
C	Glypican_2nd	e7za3C2	A: few secondary structure elements	X: Frizzled cysteine-rich domain-related (From Topology)	H: Frizzled cysteine-rich domain-related (From Topology)	T: Frizzled cysteine-rich domain-related	F: Glypican_2nd	ECOD (1.6)
D	Glypican_1st	e7za3D2	A: alpha complex topology	X: Glypican insertion domain (From Topology)	H: Glypican insertion domain (From Topology)	T: Glypican insertion domain	F: Glypican_1st	ECOD (1.6)
D	Glypican_2nd	e7za3D1	A: few secondary structure elements	X: Frizzled cysteine-rich domain-related (From Topology)	H: Frizzled cysteine-rich domain-related (From Topology)	T: Frizzled cysteine-rich domain-related	F: Glypican_2nd	ECOD (1.6)
E	I-set	e7za3E1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: I-set	ECOD (1.6)
E	I-set_11	e7za3E2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: I-set_11	ECOD (1.6)
E	TSP_1	e7za3E3	A: few secondary structure elements	X: TSP-1 type 1 repeat (From Topology)	H: TSP-1 type 1 repeat (From Topology)	T: TSP-1 type 1 repeat	F: TSP_1	ECOD (1.6)
F	I-set	e7za3F3	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: I-set	ECOD (1.6)
F	I-set_11	e7za3F2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: I-set_11	ECOD (1.6)
F	TSP_1	e7za3F1	A: few secondary structure elements	X: TSP-1 type 1 repeat (From Topology)	H: TSP-1 type 1 repeat (From Topology)	T: TSP-1 type 1 repeat	F: TSP_1	ECOD (1.6)
G	I-set	e7za3G2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: I-set	ECOD (1.6)
G	I-set_11	e7za3G3	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: I-set_11	ECOD (1.6)
G	TSP_1	e7za3G1	A: few secondary structure elements	X: TSP-1 type 1 repeat (From Topology)	H: TSP-1 type 1 repeat (From Topology)	T: TSP-1 type 1 repeat	F: TSP_1	ECOD (1.6)
H	I-set	e7za3H2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: I-set	ECOD (1.6)
H	I-set_11	e7za3H3	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: I-set_11	ECOD (1.6)
H	TSP_1	e7za3H1	A: few secondary structure elements	X: TSP-1 type 1 repeat (From Topology)	H: TSP-1 type 1 repeat (From Topology)	T: TSP-1 type 1 repeat	F: TSP_1	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
E, F, G, H	PF00090	Thrombospondin type 1 domain (TSP_1)	Thrombospondin type 1 domain		Domain
E, F, G, H	PF07679	Immunoglobulin I-set domain (I-set)	Immunoglobulin I-set domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Glypican-3	peptidyl-dipeptidase inhibitor activity enzyme regulator activity molecular function inhibitor activity peptidase regulator activity molecular function regulator activity enzyme inhibitor activity peptidase inhibitor activity	cellular response to stimulus regulation of biological process regulation of signaling regulation of cellular process cell surface receptor signaling pathway response to stimulus regulation of Wnt signaling pathway signaling regulation of canonical Wnt signaling pathway canonical Wnt signaling pathway biological regulation regulation of signal transduction cell communication regulation of response to stimulus cellular response to stimulus regulation of biological process regulation of signaling regulation of cellular process cell surface receptor signaling pathway response to stimulus regulation of Wnt signaling pathway signaling regulation of canonical Wnt signaling pathway canonical Wnt signaling pathway biological regulation regulation of signal transduction cell communication regulation of response to stimulus regulation of cell communication cellular process signal transduction Wnt signaling pathway developmental process multicellular organismal process embryonic morphogenesis embryo development gastrulation multicellular organism development anatomical structure morphogenesis ameboidal-type cell migration anatomical structure development cell migration cell motility cell migration involved in gastrulation smoothened signaling pathway cell population proliferation animal organ development cell proliferation involved in kidney development renal system development metanephros development cell proliferation involved in metanephros development kidney development system development animal organ morphogenesis ossification bone mineralization biomineral tissue development tissue development regulation of growth growth negative regulation of signaling negative regulation of biological process negative regulation of cell communication negative regulation of Wnt signaling pathway negative regulation of cellular process negative regulation of response to stimulus negative regulation of signal transduction negative regulation of canonical Wnt signaling pathway tube development respiratory tube development lung development respiratory system development positive regulation of cell communication positive regulation of signal transduction positive regulation of biological process positive regulation of response to stimulus positive regulation of smoothened signaling pathway positive regulation of cellular process regulation of smoothened signaling pathway positive regulation of signaling Wnt signaling pathway, planar cell polarity pathway positive regulation of non-canonical Wnt signaling pathway positive regulation of Wnt signaling pathway non-canonical Wnt signaling pathway positive regulation of Wnt signaling pathway, planar cell polarity pathway regulation of Wnt signaling pathway, planar cell polarity pathway regulation of non-canonical Wnt signaling pathway catabolic process positive regulation of protein metabolic process macromolecule catabolic process regulation of primary metabolic process positive regulation of metabolic process positive regulation of macromolecule metabolic process protein metabolic process regulation of protein metabolic process primary metabolic process regulation of macromolecule metabolic process protein catabolic process regulation of catabolic process positive regulation of protein catabolic process positive regulation of catabolic process metabolic process macromolecule metabolic process regulation of metabolic process regulation of protein catabolic process embryonic hindlimb morphogenesis limb development appendage development embryonic limb morphogenesis hindlimb morphogenesis embryonic appendage morphogenesis appendage morphogenesis limb morphogenesis negative regulation of smoothened signaling pathway ureteric bud development mesonephric epithelium development epithelium development kidney epithelium development mesenchymal cell proliferation involved in ureteric bud development mesonephros development mesenchymal cell proliferation cell proliferation involved in mesonephros development mesonephric tubule development anterior/posterior axis specification anterior/posterior pattern specification pattern specification process axis specification regionalization cell surface receptor protein serine/threonine kinase signaling pathway cellular response to growth factor stimulus regulation of transmembrane receptor protein serine/threonine kinase signaling pathway positive regulation of BMP signaling pathway cellular response to endogenous stimulus BMP signaling pathway enzyme-linked receptor protein signaling pathway cellular response to BMP stimulus regulation of BMP signaling pathway response to endogenous stimulus regulation of cellular response to growth factor stimulus positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway response to BMP transforming growth factor beta receptor superfamily signaling pathway response to growth factor epithelial cell proliferation negative regulation of cell population proliferation regulation of cell population proliferation biological process involved in interspecies interaction between organisms response to other organism response to bacterium response to external stimulus response to external biotic stimulus response to biotic stimulus myeloid leukocyte differentiation cellular developmental process hemopoiesis cell development myeloid cell differentiation cell differentiation osteoclast differentiation leukocyte differentiation body morphogenesis positive regulation of canonical Wnt signaling pathway regulation of localization hexose transmembrane transport D-glucose import transport carbohydrate transport positive regulation of D-glucose transmembrane transport localization positive regulation of transmembrane transport regulation of D-glucose import positive regulation of D-glucose import regulation of transport establishment of localization transmembrane transport regulation of transmembrane transport positive regulation of transport D-glucose transmembrane transport regulation of D-glucose transmembrane transport monosaccharide transmembrane transport carbohydrate transmembrane transport nephric duct morphogenesis nephron morphogenesis nephron tubule morphogenesis nephron epithelium morphogenesis nephron tubule development tube morphogenesis renal tubule development epithelial tube morphogenesis nephron development nephron epithelium development morphogenesis of an epithelium mesonephric duct morphogenesis tissue morphogenesis kidney morphogenesis nephric duct development mesonephric tubule morphogenesis renal tubule morphogenesis mesonephric duct development regulation of epithelial cell proliferation negative regulation of epithelial cell proliferation negative regulation of growth heart development coronary vasculature development vasculature development circulatory system development blood vessel development branching morphogenesis of an epithelial tube ureteric bud morphogenesis branching involved in ureteric bud morphogenesis morphogenesis of a branching structure morphogenesis of a branching epithelium import into cell positive regulation of cellular component organization regulation of cellular component organization regulation of vesicle-mediated transport vesicle-mediated transport cellular component organization positive regulation of endocytosis cellular component organization or biogenesis endocytosis regulation of endocytosis	cell periphery cellular anatomical structure plasma membrane membrane membrane-bounded organelle intracellular organelle intracellular anatomical structure organelle lytic vacuole vacuole cytoplasm intracellular membrane-bounded organelle lysosome Golgi apparatus cell periphery cellular anatomical structure plasma membrane membrane membrane-bounded organelle intracellular organelle intracellular anatomical structure organelle lytic vacuole vacuole cytoplasm intracellular membrane-bounded organelle lysosome Golgi apparatus membrane-enclosed lumen endomembrane system intracellular organelle lumen Golgi lumen organelle lumen side of membrane
E, F, G, H	Netrin receptor UNC5D	molecular transducer activity transmembrane signaling receptor activity signaling receptor activity netrin receptor activity	cell adhesion cell-cell adhesion cellular process cell-cell adhesion via plasma-membrane adhesion molecules multicellular organismal process axonogenesis cellular developmental process cell projection organization plasma membrane bounded cell projection morphogenesis cell development neuron projection development cell morphogenesis cellular component organization neurogenesis cell adhesion cell-cell adhesion cellular process cell-cell adhesion via plasma-membrane adhesion molecules multicellular organismal process axonogenesis cellular developmental process cell projection organization plasma membrane bounded cell projection morphogenesis cell development neuron projection development cell morphogenesis cellular component organization neurogenesis multicellular organism development cell projection morphogenesis neuron differentiation neuron projection morphogenesis cell differentiation anatomical structure development cellular component organization or biogenesis system development developmental process plasma membrane bounded cell projection organization axon guidance nervous system development axon development cell morphogenesis involved in neuron differentiation generation of neurons anatomical structure morphogenesis neuron projection guidance neuron development central nervous system neuron differentiation central nervous system development pyramidal neuron differentiation apoptotic process cell death programmed cell death regulation of biological process regulation of cell motility regulation of cellular process neuron migration biological regulation regulation of neuron migration regulation of locomotion regulation of cell migration cell migration cell motility locomotion	cell surface cellular anatomical structure cell periphery plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR001863	Glypican	Family
A, B, C, D	IPR019803	Glypican, conserved site	Conserved Site
E, F, G, H	IPR000884	Thrombospondin type-1 (TSP1) repeat	Repeat
E, F, G, H	IPR042058	UNC5D, Death domain	Domain
E, F, G, H	IPR011029	Death-like domain superfamily	Homologous Superfamily
E, F, G, H	IPR036179	Immunoglobulin-like domain superfamily	Homologous Superfamily
E, F, G, H	IPR003598	Immunoglobulin subtype 2	Domain
E, F, G, H	IPR036383	Thrombospondin type-1 repeat superfamily	Homologous Superfamily
E, F, G, H	IPR033772	UPA domain	Domain
E, F, G, H	IPR037936	Netrin receptor UNC5A-D	Family
E, F, G, H	IPR000488	Death domain	Domain
E, F, G, H	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
E, F, G, H	IPR003599	Immunoglobulin domain subtype	Domain
E, F, G, H	IPR007110	Immunoglobulin-like domain	Domain
E, F, G, H	IPR013098	Immunoglobulin I-set	Domain
E, F, G, H	IPR000906	ZU5 domain	Domain