8AA3 | pdb_00008aa3

Core SusCD transporter units from the inactive levan utilisome in the presence of levan fructo-oligosaccharides DP 15-25

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: mpstruc

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth B], C [auth J]	PF07980	SusD family (SusD_RagB)	SusD family	-	Repeat
A [auth B], C [auth J]	PF14322	Starch-binding associating with outer membrane (SusD-like_3)	Starch-binding associating with outer membrane	-	Repeat
B [auth A], D [auth I]	PF00593	TonB dependent receptor-like, beta-barrel (TonB_dep_Rec_b-barrel)	TonB dependent receptor-like, beta-barrel	This entry represents the beta-barrel domain of TonB-dependent receptors, such as BtuB, CirA, FatA, FcuT, FecA, FepA, among others [1].	Domain
B [auth A], D [auth I]	PF07715	TonB-dependent Receptor Plug Domain (Plug)	TonB-dependent Receptor Plug Domain	The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors ([1]). It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens ...	The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors ([1]). It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth B], C [auth J]	SusD homolog	cation binding ion binding binding metal ion binding small molecule binding	-	cell periphery cell outer membrane cellular anatomical structure external encapsulating structure membrane cell envelope outer membrane
B [auth A], D [auth I]	SusC homolog	cation binding ion binding binding metal ion binding small molecule binding	-	cell periphery cell outer membrane cellular anatomical structure external encapsulating structure membrane cell envelope outer membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth B], C [auth J]	IPR012944	RagB/SusD domain	Domain
A [auth B], C [auth J]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
A [auth B], C [auth J]	IPR033985	SusD-like, N-terminal	Domain
B [auth A], D [auth I]	IPR039426	TonB-dependent receptor-like	Family
B [auth A], D [auth I]	IPR037066	TonB-dependent receptor, plug domain superfamily	Homologous Superfamily
B [auth A], D [auth I]	IPR023997	TonB-dependent outer membrane protein SusC/RagA, conserved site	Conserved Site
B [auth A], D [auth I]	IPR036942	TonB-dependent receptor-like, beta-barrel domain superfamily	Homologous Superfamily
B [auth A], D [auth I]	IPR023996	TonB-dependent outer membrane protein, SusC/RagA	Family
B [auth A], D [auth I]	IPR000531	TonB-dependent receptor-like, beta-barrel	Domain
B [auth A], D [auth I]	IPR012910	TonB-dependent receptor, plug domain	Domain
B [auth A], D [auth I]	IPR008969	Carboxypeptidase-like, regulatory domain superfamily	Homologous Superfamily

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A [auth B], B [auth A], C [auth J], D [auth I]	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A [auth B], B [auth A], C [auth J], D [auth I]	mpstruc	TRANSMEMBRANE PROTEINS: BETA-BARREL	Polysaccharide Utilization Proteins	SusCD fructo-oligosaccharide (FOS) transporter with bound FOS DP 8-12

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.