8BC6 | pdb_00008bc6

Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex an aspartimide degron peptide

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CYippee-Mis18_1e8bc6C1 A: beta complex topologyX: ETN0001 domain-like (From Homology)H: ETN0001 domain-likeT: Mss4-likeF: Yippee-Mis18_1ECOD (1.6)
BYippee-Mis18_1e8bc6B1 A: beta complex topologyX: ETN0001 domain-like (From Homology)H: ETN0001 domain-likeT: Mss4-likeF: Yippee-Mis18_1ECOD (1.6)
AYippee-Mis18_1e8bc6A1 A: beta complex topologyX: ETN0001 domain-like (From Homology)H: ETN0001 domain-likeT: Mss4-likeF: Yippee-Mis18_1ECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
D, E
GLN-MET-GLN-SNN---
A, B, C
Cereblon isoform 4 - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C
IPR034750CULT domainDomain

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
D, E
SNN Parent Component: ASN

RESID:  AA0302 , AA0593

PSI-MOD :  L-aspartimide MOD:00307 , 2-(2-aminosuccinimidyl)pentanedioic acid (Asn) MOD:01940 , 2-(2-aminosuccinimidyl)pentanedioic acid (Asp) MOD:01941