8ZHT | pdb_00008zht

Structure of PpiD-YfgM complex

External Resource: Annotation


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF13616PPIC-type PPIASE domain (Rotamase_3)PPIC-type PPIASE domainRotamases increase the rate of protein folding by catalysing the interconversion of cis-proline and trans-proline. Domain
PF13623SurA-like N-terminal domain (SurA_N_2)SurA-like N-terminal domainThis domain is found at the N-terminal of the chaperone SurA and related proteins such as PpiD and foldase PrsA [1,2,3]. This is a helical domain that together with the C-terminal forms a domain containing substrate-binding sites [2,3]. The C-termina ...This domain is found at the N-terminal of the chaperone SurA and related proteins such as PpiD and foldase PrsA [1,2,3]. This is a helical domain that together with the C-terminal forms a domain containing substrate-binding sites [2,3]. The C-terminal of the SurA protein folds back and forms part of this domain also but is not included in the current alignment.
Domain
PF09976Tetratricopeptide repeat-like domain (TPR_21)Tetratricopeptide repeat-like domain- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Peptidyl-prolyl cis-trans isomerase -
Tetratricopeptide repeat protein- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR046357Peptidyl-prolyl cis-trans isomerase domain superfamilyHomologous Superfamily
IPR027304Trigger factor/SurA domain superfamilyHomologous Superfamily
IPR052029Periplasmic chaperone PpiDFamily
IPR018704Ancillary SecYEG translocon subunit/Cell division coordinator CpoB, TPR domainDomain
IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily