9HRI | pdb_00009hri

Human holo aromatic L-amino acid decarboxylase (AADC) L353P variant native structure

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Protein Modification Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	PLP-dependent transferases	8083278	3000954	SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00282	Pyridoxal-dependent decarboxylase conserved domain (Pyridoxal_deC)	Pyridoxal-dependent decarboxylase conserved domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Aromatic-L-amino-acid decarboxylase	aromatic-L-amino-acid decarboxylase activity 5-hydroxy-L-tryptophan decarboxylase activity carboxy-lyase activity lyase activity catalytic activity carbon-carbon lyase activity vitamin binding vitamin B6 binding pyridoxal phosphate binding ion binding binding anion binding heterocyclic compound binding small molecule binding aromatic-L-amino-acid decarboxylase activity 5-hydroxy-L-tryptophan decarboxylase activity carboxy-lyase activity lyase activity catalytic activity carbon-carbon lyase activity vitamin binding vitamin B6 binding pyridoxal phosphate binding ion binding binding anion binding heterocyclic compound binding small molecule binding L-dopa decarboxylase activity protein binding enzyme binding	dopamine metabolic process catechol-containing compound metabolic process amine metabolic process biogenic amine biosynthetic process biosynthetic process catecholamine metabolic process amine biosynthetic process dopamine biosynthetic process phenol-containing compound metabolic process catecholamine biosynthetic process phenol-containing compound biosynthetic process metabolic process cellular process catechol-containing compound biosynthetic process dopamine metabolic process catechol-containing compound metabolic process amine metabolic process biogenic amine biosynthetic process biosynthetic process catecholamine metabolic process amine biosynthetic process dopamine biosynthetic process phenol-containing compound metabolic process catecholamine biosynthetic process phenol-containing compound biosynthetic process metabolic process cellular process catechol-containing compound biosynthetic process biogenic amine metabolic process macromolecule metabolic process gene expression macromolecule biosynthetic process serotonin metabolic process indole-containing compound biosynthetic process indole-containing compound metabolic process primary amino compound biosynthetic process serotonin biosynthetic process oxoacid metabolic process carboxylic acid metabolic process small molecule metabolic process organic acid metabolic process developmental process multicellular organism development multicellular organismal process anatomical structure development animal organ development kidney development renal system development system development response to stimulus response to chemical response to toxic substance amino acid metabolic process primary metabolic process	extracellular exosome membrane-bounded organelle extracellular vesicle cellular anatomical structure extracellular organelle extracellular region organelle extracellular space vesicle extracellular membrane-bounded organelle intracellular anatomical structure cytoplasm cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR015421	Pyridoxal phosphate-dependent transferase, major domain	Homologous Superfamily
A	IPR015422	Pyridoxal phosphate-dependent transferase, small domain	Homologous Superfamily
A	IPR015424	Pyridoxal phosphate-dependent transferase	Homologous Superfamily
A	IPR010977	Aromatic-L-amino-acid decarboxylase	Family
A	IPR002129	Pyridoxal phosphate-dependent decarboxylase	Family
A	IPR021115	Pyridoxal-phosphate binding site	Binding Site

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: P20711	aromatic L-amino acid decarboxylase deficiency Parkinson disease Liver Cirrhosis, Experimental major depressive disorder pancreatic ductal adenocarcinoma acute lymphoblastic leukemia phaeochromocytoma psoriasis B-cell acute lymphoblastic leukemia childhood acute lymphoblastic leukemia esophageal adenocarcinoma intellectual disability lung carcinoma nephrosclerosis pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia aromatic L-amino acid decarboxylase deficiency Parkinson disease Liver Cirrhosis, Experimental major depressive disorder pancreatic ductal adenocarcinoma acute lymphoblastic leukemia phaeochromocytoma psoriasis B-cell acute lymphoblastic leukemia childhood acute lymphoblastic leukemia esophageal adenocarcinoma intellectual disability lung carcinoma nephrosclerosis pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia parkinsonian disorder adenoma autosomal recessive juvenile Parkinson disease 2 psychiatric disorder schizophrenia extra-adrenal sympathetic paraganglioma large cell medulloblastoma major affective disorder 2 paranoid schizophrenia adrenal gland pheochromocytoma postencephalitic Parkinson disease bipolar disorder ulcerative colitis

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A	LLP	Parent Component: LYS RESID: AA0119 PSI-MOD : N6-pyridoxal phosphate-L-lysine MOD:00128

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.