9IUJ | pdb_00009iuj

Integrin alpha-v beta-3 in complex with rhodostomin


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyIntegrin domains 8055489 3002062 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyIntegrin domains 8055305 3002062 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyIntegrin alpha N-terminal domain 8041564 3000314 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyPlexin repeat-like 8042732 3000415 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyIntegrin domains 8055552 3002062 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyIntegrin domains 8055552 3002062 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyvWA-like 8055554 3000832 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyDisintegrin-like 8044067 3000923 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF20805Integrin alpha Ig-like domain 2 (Integrin_A_Ig_2)Integrin alpha Ig-like domain 2This domain is found in integrin alpha and integrin alpha precursors to the C terminus of a number of Pfam:PF01839 repeats and to the N-terminus of the Pfam:PF00357 cytoplasmic region. This region is composed of an immunoglobulin-like domain. Domain
PF01839FG-GAP repeat (FG-GAP)FG-GAP repeat- Repeat
PF08441Integrin alpha Ig-like domain 1 (Integrin_A_Ig_1)Integrin alpha Ig-like domain 1This domain is found in integrin alpha and integrin alpha precursors to the C terminus of a number of Pfam:PF01839 repeats and to the N-terminus of the Pfam:PF00357 cytoplasmic region. This region is composed of an immunoglobulin-like domain. Domain
PF18372Integrin beta epidermal growth factor like domain 1 (I-EGF_1)Integrin beta epidermal growth factor like domain 1This is the I-EGF 1 domain found in several integrin betas such as integrin beta 1-7. Structural analysis reveal an epidermal growth factor-like (I-EGF) domains 1 and 2 [1]. EGF1 lacks one disulfide (C2-C4) relative to the integrin EGF 2, 3, and 4 do ...This is the I-EGF 1 domain found in several integrin betas such as integrin beta 1-7. Structural analysis reveal an epidermal growth factor-like (I-EGF) domains 1 and 2 [1]. EGF1 lacks one disulfide (C2-C4) relative to the integrin EGF 2, 3, and 4 domains, this allows the C-terminal end of EGF1 to flex remarkably relative to its N-terminal end [14].
Domain
PF17205Integrin plexin domain (PSI_integrin)Integrin plexin domainThis short disulphide rich domain is found at the N-terminus of integrin beta chains. Domain
PF00362Integrin beta chain VWA domain (Integrin_beta)Integrin beta chain VWA domainIntegrins have been found in animals and their homologues have also been found in cyanobacteria, probably due to horizontal gene transfer [1]. This domain corresponds to the integrin beta VWA domain. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Integrin alpha-V,Integrin alpha-V,Uncharacterized protein DKFZp686C11235
Integrin beta-3,Integrin beta-3,Uncharacterized protein DKFZp686C11235
Disintegrin rhodostomin

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR013517FG-GAP repeatRepeat
IPR048286Integrin alpha, third immunoglobulin-like domainDomain
IPR013649Integrin alpha, first immunoglubulin-like domainDomain
IPR048285Integrin alpha, second immunoglobulin-like domainDomain
IPR032695Integrin domain superfamilyHomologous Superfamily
IPR013519Integrin alpha beta-propellorRepeat
IPR000413Integrin alpha chainFamily
IPR028994Integrin alpha, N-terminalHomologous Superfamily
IPR018184Integrin alpha chain, C-terminal cytoplasmic region, conserved siteConserved Site
IPR003597Immunoglobulin C1-setDomain
IPR013783Immunoglobulin-like foldHomologous Superfamily
IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
IPR013106Immunoglobulin V-set domainDomain
IPR003599Immunoglobulin domain subtypeDomain
IPR007110Immunoglobulin-like domainDomain
IPR050380Immune Recognition and Response ModulatorsFamily
IPR003006Immunoglobulin/major histocompatibility complex, conserved siteConserved Site
IPR033760Integrin beta N-terminalDomain
IPR036465von Willebrand factor A-like domain superfamilyHomologous Superfamily
IPR032695Integrin domain superfamilyHomologous Superfamily
IPR002369Integrin beta subunit, VWA domainDomain
IPR040622Integrin beta, epidermal growth factor-like domain 1Domain
IPR036349Integrin beta tail domain superfamilyHomologous Superfamily
IPR014836Integrin beta subunit, cytoplasmic domainDomain
IPR012896Integrin beta subunit, tailDomain
IPR013111Epidermal growth factor-like domain, extracellularDomain
IPR015812Integrin beta subunitFamily
IPR016201PSI domainDomain
IPR003597Immunoglobulin C1-setDomain
IPR013783Immunoglobulin-like foldHomologous Superfamily
IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
IPR013106Immunoglobulin V-set domainDomain
IPR003599Immunoglobulin domain subtypeDomain
IPR007110Immunoglobulin-like domainDomain
IPR050380Immune Recognition and Response ModulatorsFamily
IPR003006Immunoglobulin/major histocompatibility complex, conserved siteConserved Site
IPR034027Reprolysin domain, adamalysin-typeDomain
IPR024079Metallopeptidase, catalytic domain superfamilyHomologous Superfamily
IPR018358Disintegrin, conserved siteConserved Site
IPR001762Disintegrin domainDomain
IPR002870Peptidase M12B, propeptideDomain
IPR001590Peptidase M12B, ADAM/reprolysinDomain
IPR036436Disintegrin domain superfamilyHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosP06756
PharosP05106