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9KNA
|
pdb_00009kna
NSD2-PWWP1 domain bound with compound 6
External Resource: Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Gene Ontology: Gene Product Annotation
Gene Ontology Database Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A
,
B
Histone-lysine N-methyltransferase NSD2
histone H3 methyltransferase activity
catalytic activity, acting on a protein
transferase activity, transferring one-carbon groups
protein methyltransferase activity
histone modifying activity
transferase activity
methyltransferase activity
catalytic activity
histone methyltransferase activity
protein-lysine N-methyltransferase activity
histone H3K36 dimethyltransferase activity
S-adenosylmethionine-dependent methyltransferase activity
histone H3K36 methyltransferase activity
lysine N-methyltransferase activity
histone H3 methyltransferase activity
catalytic activity, acting on a protein
transferase activity, transferring one-carbon groups
protein methyltransferase activity
histone modifying activity
transferase activity
methyltransferase activity
catalytic activity
histone methyltransferase activity
protein-lysine N-methyltransferase activity
histone H3K36 dimethyltransferase activity
S-adenosylmethionine-dependent methyltransferase activity
histone H3K36 methyltransferase activity
lysine N-methyltransferase activity
N-methyltransferase activity
sequence-specific DNA binding
DNA binding
binding
nucleic acid binding
histone H3K36 trimethyltransferase activity
histone H4 methyltransferase activity
histone H4K20 methyltransferase activity
chromatin binding
cation binding
transition metal ion binding
zinc ion binding
ion binding
metal ion binding
small molecule binding
Less
developmental process
heart development
multicellular organismal process
cardiac atrium morphogenesis
cardiac chamber morphogenesis
atrial septum secundum morphogenesis
animal organ development
heart morphogenesis
cardiac atrium development
circulatory system development
multicellular organism development
anatomical structure morphogenesis
cardiac septum development
cardiac septum morphogenesis
cardiac chamber development
developmental process
heart development
multicellular organismal process
cardiac atrium morphogenesis
cardiac chamber morphogenesis
atrial septum secundum morphogenesis
animal organ development
heart morphogenesis
cardiac atrium development
circulatory system development
multicellular organism development
anatomical structure morphogenesis
cardiac septum development
cardiac septum morphogenesis
cardiac chamber development
anatomical structure development
atrial septum morphogenesis
animal organ morphogenesis
septum secundum development
atrial septum development
system development
localization
regulation of localization
establishment of protein localization
regulation of biological process
regulation of protein localization
macromolecule localization
regulation of establishment of protein localization
biological regulation
intracellular protein localization
establishment of localization
methylation
metabolic process
cellular process
skeletal system development
bone development
ventricular septum development
ventricular septum morphogenesis
membranous septum morphogenesis
cardiac ventricle development
regulation of cellular process
RNA metabolic process
regulation of primary metabolic process
nucleobase-containing compound metabolic process
RNA biosynthetic process
nucleic acid biosynthetic process
DNA-templated transcription
regulation of RNA metabolic process
regulation of nucleobase-containing compound metabolic process
regulation of RNA biosynthetic process
regulation of biosynthetic process
primary metabolic process
regulation of macromolecule metabolic process
nucleobase-containing compound biosynthetic process
gene expression
macromolecule biosynthetic process
nucleic acid metabolic process
regulation of gene expression
biosynthetic process
regulation of macromolecule biosynthetic process
regulation of DNA-templated transcription
macromolecule metabolic process
regulation of metabolic process
negative regulation of biological process
negative regulation of RNA biosynthetic process
transcription by RNA polymerase II
negative regulation of cellular process
negative regulation of nucleobase-containing compound metabolic process
negative regulation of macromolecule metabolic process
regulation of transcription by RNA polymerase II
negative regulation of DNA-templated transcription
negative regulation of transcription by RNA polymerase II
negative regulation of metabolic process
negative regulation of biosynthetic process
negative regulation of macromolecule biosynthetic process
negative regulation of RNA metabolic process
cellular response to stimulus
regulation of double-strand break repair
response to stimulus
regulation of cellular response to stress
cellular response to stress
response to stress
regulation of response to stress
regulation of double-strand break repair via nonhomologous end joining
DNA repair
double-strand break repair
double-strand break repair via nonhomologous end joining
DNA metabolic process
regulation of DNA repair
DNA damage response
regulation of response to stimulus
regulation of DNA metabolic process
septum primum development
atrial septum primum morphogenesis
adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains
regulation of leukocyte activation
regulation of cell activation
B cell activation involved in immune response
positive regulation of macromolecule biosynthetic process
positive regulation of immune response
regulation of immune system process
positive regulation of macromolecule metabolic process
positive regulation of isotype switching to IgA isotypes
positive regulation of DNA recombination
positive regulation of immunoglobulin mediated immune response
immune response
DNA recombination
immune effector process
positive regulation of DNA metabolic process
B cell mediated immunity
positive regulation of production of molecular mediator of immune response
immunoglobulin production
regulation of developmental process
positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains
somatic cell DNA recombination
somatic diversification of immunoglobulins involved in immune response
positive regulation of lymphocyte activation
somatic recombination of immunoglobulin gene segments
positive regulation of biosynthetic process
regulation of immunoglobulin mediated immune response
leukocyte activation involved in immune response
regulation of B cell activation
positive regulation of isotype switching
positive regulation of immune effector process
positive regulation of cellular process
production of molecular mediator of immune response
positive regulation of immunoglobulin production
regulation of isotype switching
cell activation
isotype switching to IgA isotypes
positive regulation of gene expression
immune system process
somatic diversification of immune receptors via germline recombination within a single locus
regulation of lymphocyte activation
lymphocyte mediated immunity
regulation of immune effector process
regulation of DNA recombination
positive regulation of leukocyte mediated immunity
cell activation involved in immune response
positive regulation of developmental process
positive regulation of cell activation
positive regulation of metabolic process
positive regulation of leukocyte activation
leukocyte mediated immunity
somatic diversification of immune receptors
positive regulation of adaptive immune response
positive regulation of immune system process
somatic recombination of immunoglobulin genes involved in immune response
regulation of adaptive immune response
regulation of B cell mediated immunity
somatic diversification of immunoglobulins
regulation of leukocyte mediated immunity
regulation of immune response
positive regulation of multicellular organismal process
regulation of production of molecular mediator of immune response
isotype switching
immune system development
immunoglobulin production involved in immunoglobulin-mediated immune response
positive regulation of lymphocyte mediated immunity
regulation of isotype switching to IgA isotypes
positive regulation of biological process
lymphocyte activation
positive regulation of B cell mediated immunity
leukocyte activation
positive regulation of response to stimulus
regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains
regulation of multicellular organismal process
lymphocyte activation involved in immune response
B cell activation
immunoglobulin mediated immune response
adaptive immune response
positive regulation of B cell activation
regulation of lymphocyte mediated immunity
regulation of immunoglobulin production
Less
cellular anatomical structure
intracellular anatomical structure
cytoplasm
intracellular organelle
organelle
membraneless organelle
intracellular membraneless organelle
chromatin
chromosome
membrane-bounded organelle
nucleus
membrane-enclosed lumen
intracellular membrane-bounded organelle
nucleolus
cellular anatomical structure
intracellular anatomical structure
cytoplasm
intracellular organelle
organelle
membraneless organelle
intracellular membraneless organelle
chromatin
chromosome
membrane-bounded organelle
nucleus
membrane-enclosed lumen
intracellular membrane-bounded organelle
nucleolus
intracellular organelle lumen
organelle lumen
nuclear lumen
nucleoplasm
Less
InterPro: Protein Family Classification
InterPro Database Homepage
Chains
Accession
Name
Type
A
,
B
IPR001965
Zinc finger, PHD-type
Domain
A
,
B
IPR046341
SET domain superfamily
Homologous Superfamily
A
,
B
IPR047441
Nuclear SET domain-containing protein 2, third PHD finger
Domain
A
,
B
IPR001214
SET domain
Domain
A
,
B
IPR000313
PWWP domain
Domain
A
,
B
IPR047426
Histone-lysine N-methyltransferase NSD1 / NSD2, first PHD finger
Domain
A
,
B
IPR047442
Nuclear SET domain-containing protein 2, fifth PHD finger
Domain
A
,
B
IPR003616
Post-SET domain
Domain
A
,
B
IPR055198
Histone-lysine N-methyltransferase NSD-like, PHD zinc finger
Domain
A
,
B
IPR047434
Nuclear SET domain-containing protein 2, first PWWP domain
Domain
A
,
B
IPR013083
Zinc finger, RING/FYVE/PHD-type
Homologous Superfamily
A
,
B
IPR001841
Zinc finger, RING-type
Domain
A
,
B
IPR036910
High mobility group box domain superfamily
Homologous Superfamily
A
,
B
IPR006560
AWS domain
Domain
A
,
B
IPR055197
Histone-lysine N-methyltransferase NSD-like, variant PHD zinc finger
Domain
A
,
B
IPR041306
NSD, Cys-His rich domain
Domain
A
,
B
IPR050777
SET2 Histone-Lysine N-Methyltransferase
Family
A
,
B
IPR019787
Zinc finger, PHD-finger
Domain
A
,
B
IPR011011
Zinc finger, FYVE/PHD-type
Homologous Superfamily
A
,
B
IPR019786
Zinc finger, PHD-type, conserved site
Conserved Site
A
,
B
IPR047443
Nuclear SET domain-containing protein 2, HMG box
Domain
A
,
B
IPR047437
Nuclear SET domain-containing protein 2, SET domain
Domain
A
,
B
IPR047439
Nuclear SET domain-containing protein 2, second PHD finger
Domain
A
,
B
IPR047435
Nuclear SET domain-containing protein 2, second PWWP domain
Domain
A
,
B
IPR009071
High mobility group box domain
Domain
Pharos: Disease Associations
Pharos Homepage Annotation
Chains
Drug Target  
Associated Disease
A
,
B
Pharos
: 
O96028
Wolf-Hirschhorn syndrome
breast carcinoma
breast cancer
Malignant neoplasm of breast
medulloblastoma
osteosarcoma
pancreatic intraductal papillary-mucinous carcinoma
adrenal cortex carcinoma
pituitary cancer
bone marrow disease
primitive neuroectodermal tumor
cancer
ductal breast carcinoma in situ
invasive ductal breast carcinoma
lung adenocarcinoma
Wolf-Hirschhorn syndrome
breast carcinoma
breast cancer
Malignant neoplasm of breast
medulloblastoma
osteosarcoma
pancreatic intraductal papillary-mucinous carcinoma
adrenal cortex carcinoma
pituitary cancer
bone marrow disease
primitive neuroectodermal tumor
cancer
ductal breast carcinoma in situ
invasive ductal breast carcinoma
lung adenocarcinoma
malignant glioma
ovarian cancer
pancreatic intraductal papillary-mucinous neoplasm
atopic eczema
subependymal giant cell astrocytoma
gastric carcinoma
large cell medulloblastoma
lung cancer
malignant mesothelioma
non-small cell lung carcinoma
pancreatic ductal adenocarcinoma
pilocytic astrocytoma
atypical teratoid rhabdoid tumor
childhood acute lymphoblastic leukemia
glioblastoma
malignant ependymoma
Less
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