DEATH DOMAIN OF P75 LOW AFFINITY NEUROTROPHIN RECEPTOR, RESIDUES 334-418, NMR, 20 STRUCTURES
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | NOESY | 7.0 | 301 | |||||
| 2 | COSY | 7.0 | 301 | |||||
| 3 | TOCSY | 7.0 | 301 | |||||
| 4 | 3D NOESY-15N-HSQC | 7.0 | 301 | |||||
| 5 | 3D TOCSY-HSQC | 7.0 | 301 | |||||
| 6 | 3D HNHA | 7.0 | 301 | |||||
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | DMX800 | 800 |
| 2 | Bruker | DMX600 | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| VARIABLE TARGET FUNCTION (DIANA) APPROACH | DIANA MINIMIZATION TO TARGET FUNCTION LESS THAN 1, RESTRAINED ENERGY MINIMIZATION USING OPAL | OPAL |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | LOWEST TARGET FUNCTION AFTER DIANA |
| Conformers Calculated Total Number | 50 |
| Conformers Submitted Total Number | 20 |
| Additional NMR Experimental Information | |
|---|---|
| Details | DISTANCE CONSTRAINTS FROM 3D NOESY-15N-HSQC AND 2D NOESY, COUPLING CONSTANTS FROM 3D HNHA-EXPERIMENT, 2QF-COSY, AND 15N-HSQC. A 15N-LABELED SAMPLE OF P75ICD WAS USED. CONSTRAINTS USED: 914 UPPER DISTANCE LIMITS FROM NOE DATA 154 COUPLING CONSTANTS CONSTRAINING DIHEDRAL ANGLES IONIC_STRENGTH: NO SALT ADDED PRESSURE: 1 ATM SOLVENT SYSTEM: 90% H2O/10% D2O |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | refinement | OPAL | LUGINBUHL | |
| 2 | structure solution | EASY | ||
| 3 | structure solution | HABAS | ||
| 4 | structure solution | DIANA | ||
| 5 | structure solution | OPAL | ||
