2JOV | pdb_00002jov

NMR Structure of Clostridium Perfringens Protein CPE0013. Northeast Structural Genomics Target CpR31.

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	1 mM [U-100% 13C; U-100% 15N] protein, 20 mM MES, 100 mM NaCl, 10 mM DTT, 5 mM CaCl2, 0.02 % NaN3, 5 % D2O	95% H2O/5% D2O	100	6.5	ambient	293
2	3D HNCO	1 mM [U-100% 13C; U-100% 15N] protein, 20 mM MES, 100 mM NaCl, 10 mM DTT, 5 mM CaCl2, 0.02 % NaN3, 5 % D2O	95% H2O/5% D2O	100	6.5	ambient	293
3	3D HNCA	1 mM [U-100% 13C; U-100% 15N] protein, 20 mM MES, 100 mM NaCl, 10 mM DTT, 5 mM CaCl2, 0.02 % NaN3, 5 % D2O	95% H2O/5% D2O	100	6.5	ambient	293
4	3D HN(CO)CA	1 mM [U-100% 13C; U-100% 15N] protein, 20 mM MES, 100 mM NaCl, 10 mM DTT, 5 mM CaCl2, 0.02 % NaN3, 5 % D2O	95% H2O/5% D2O	100	6.5	ambient	293
5	3D CBCA(CO)NH	1 mM [U-100% 13C; U-100% 15N] protein, 20 mM MES, 100 mM NaCl, 10 mM DTT, 5 mM CaCl2, 0.02 % NaN3, 5 % D2O	95% H2O/5% D2O	100	6.5	ambient	293
6	3D HNCACB	1 mM [U-100% 13C; U-100% 15N] protein, 20 mM MES, 100 mM NaCl, 10 mM DTT, 5 mM CaCl2, 0.02 % NaN3, 5 % D2O	95% H2O/5% D2O	100	6.5	ambient	293
7	2D 1H-13C HSQC	1 mM [U-100% 13C; U-100% 15N] protein, 20 mM MES, 100 mM NaCl, 10 mM DTT, 5 mM CaCl2, 0.02 % NaN3	100% D2O	100	6.5	ambient	293
8	2D 1H-13C HSQC	1 mM [U-5% 13C; U-100% 15N] protein, 20 mM MES, 100 mM NaCl, 10 mM DTT, 5 mM CaCl2, 0.02 % NaN3, 5 % D2O	95% H2O/5% D2O	100	6.5	ambient	293
9	3D HBHA(CO)NH	1 mM [U-100% 13C; U-100% 15N] protein, 20 mM MES, 100 mM NaCl, 10 mM DTT, 5 mM CaCl2, 0.02 % NaN3, 5 % D2O	95% H2O/5% D2O	100	6.5	ambient	293
10	3D HCCH-TOCSY	1 mM [U-100% 13C; U-100% 15N] protein, 20 mM MES, 100 mM NaCl, 10 mM DTT, 5 mM CaCl2, 0.02 % NaN3	100% D2O	100	6.5	ambient	293
11	3D 1H-15N NOESY	1 mM [U-100% 13C; U-100% 15N] protein, 20 mM MES, 100 mM NaCl, 10 mM DTT, 5 mM CaCl2, 0.02 % NaN3, 5 % D2O	95% H2O/5% D2O	100	6.5	ambient	293
12	3D 1H-13C NOESY	1 mM [U-100% 13C; U-100% 15N] protein, 20 mM MES, 100 mM NaCl, 10 mM DTT, 5 mM CaCl2, 0.02 % NaN3, 5 % D2O	95% H2O/5% D2O	100	6.5	ambient	293
13	3D 1H-13C NOESY	1 mM [U-100% 13C; U-100% 15N] protein, 20 mM MES, 100 mM NaCl, 10 mM DTT, 5 mM CaCl2, 0.02 % NaN3	100% D2O	100	6.5	ambient	293

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE	700

NMR Refinement
Method	Details	Software
DGSA-distance geometry simulated annealing	DGSA calculation using xplor NIH and then followed by CNS water refinement.	CNS

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	30
Conformers Submitted Total Number	20
Representative Model	1 (lowest total energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	refinement	CNS	1.1	Brunger, Adams, Clore, Gros, Nilges and Read
2	structure solution	X-PLOR NIH	2.15.0	Schwieters, Kuszewski, Tjandra and Clore
3	data analysis	AutoStructure		Huang, Swapana, Rajan, Ke, Xia, Shukla, Inouye and Montelione
4	data analysis	Sparky		Goddard
5	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.