2L55 | pdb_00002l55

Solution structure of the C-terminal domain of SilB from Cupriavidus metallidurans

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	1 mM [U-100% 13C; U-100% 15N] protein, 50 mM MES	90% H2O/10% D2O	50	6.0	ambient	298
2	2D 1H-13C HSQC	1 mM [U-100% 13C; U-100% 15N] protein, 50 mM MES	90% H2O/10% D2O	50	6.0	ambient	298
3	3D HNCO	1 mM [U-100% 13C; U-100% 15N] protein, 50 mM MES	90% H2O/10% D2O	50	6.0	ambient	298
4	3D HNCACB	1 mM [U-100% 13C; U-100% 15N] protein, 50 mM MES	90% H2O/10% D2O	50	6.0	ambient	298
5	3D HN(CO)CA	1 mM [U-100% 13C; U-100% 15N] protein, 50 mM MES	90% H2O/10% D2O	50	6.0	ambient	298
6	3D HN(COCA)CB	1 mM [U-100% 13C; U-100% 15N] protein, 50 mM MES	90% H2O/10% D2O	50	6.0	ambient	298
7	3D-intraHNCA	1 mM [U-100% 13C; U-100% 15N] protein, 50 mM MES	90% H2O/10% D2O	50	6.0	ambient	298
8	3D-intraHN(CA)CB	1 mM [U-100% 13C; U-100% 15N] protein, 50 mM MES	90% H2O/10% D2O	50	6.0	ambient	298
9	2D 1H-15N HADAMAC	1 mM [U-100% 13C; U-100% 15N] protein, 50 mM MES	90% H2O/10% D2O	50	6.0	ambient	298
10	3D C(CO)NH	1 mM [U-100% 13C; U-100% 15N] protein, 50 mM MES	90% H2O/10% D2O	50	6.0	ambient	298
11	3D 1H-15N NOESY	1 mM [U-100% 15N] protein, 50 mM MES	90% H2O/10% D2O	50	6.0	ambient	298
12	3D 1H-13C NOESY	1 mM [U-100% 13C; U-100% 15N] protein, 50 mM MES	90% H2O/10% D2O	50	6.0	ambient	298
13	2D 1H-1H NOESY	1 mM [U-100% 15N] protein, 50 mM MES	100% D2O	50	6.0	ambient	298
14	T1 relaxation	1 mM [U-100% 15N] protein, 50 mM MES	90% H2O/10% D2O	50	6.0	ambient	298
15	T1rho relaxation	1 mM [U-100% 15N] protein, 50 mM MES	90% H2O/10% D2O	50	6.0	ambient	298
16	T2 relaxation	1 mM [U-100% 15N] protein, 50 mM MES	90% H2O/10% D2O	50	6.0	ambient	298
17	Heteronuclear NOE	1 mM [U-100% 15N] protein, 50 mM MES	90% H2O/10% D2O	50	6.0	ambient	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Varian	VNMRS	800
2	Varian	VNMRS	600
3	Varian	VNMRS	600

NMR Refinement
Method	Details	Software
simulated annealing, simulated annealing, molecular dynamics	CYANA (UNIO08), CNS, CNS, water refinement	NMRPipe

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	1000
Conformers Submitted Total Number	20
Representative Model	1 (fewest violations)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2	collection	VnmrJ		Varian
3	data analysis	NMRView		Johnson, One Moon Scientific
4	chemical shift assignment	BATCH		Lescop, Brutscher
5	peak picking	UNIO08		Torsten Herrmann
6	chemical shift assignment	UNIO08		Torsten Herrmann
7	structure solution	UNIO08		Torsten Herrmann
8	structure solution	CNS		Brunger, Adams, Clore, Gros, Nilges and Read
9	data analysis	curvefit		AG Palmer
10	determination of dihedral angles	TALOS		Cornilescu, Delaglio and Bax
11	refinement	CNS		Brunger, Adams, Clore, Gros, Nilges and Read