U5P: URIDINE-5'-MONOPHOSPHATE
U5P is a Ligand Of Interest in 2J4K designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2J4K_U5P_D_227 | 78% | 3% | 0.111 | 0.955 | 4.12 | 1.91 | 10 | 9 | 0 | 0 | 100% | 1 |
| 2J4K_U5P_F_227 | 77% | 3% | 0.118 | 0.957 | 4.14 | 1.89 | 11 | 7 | 0 | 0 | 100% | 1 |
| 2J4K_U5P_E_227 | 64% | 3% | 0.13 | 0.927 | 4.31 | 1.92 | 10 | 8 | 0 | 0 | 100% | 1 |
| 2J4K_U5P_A_227 | 50% | 3% | 0.157 | 0.907 | 4.33 | 1.85 | 10 | 6 | 0 | 0 | 100% | 1 |
| 2J4K_U5P_B_227 | 34% | 3% | 0.188 | 0.872 | 4.45 | 1.83 | 10 | 7 | 1 | 0 | 100% | 1 |
| 2J4K_U5P_C_227 | 9% | 3% | 0.276 | 0.762 | 4.49 | 1.82 | 10 | 7 | 0 | 0 | 100% | 1 |
| 2J4J_U5P_A_227 | 92% | 33% | 0.077 | 0.967 | 1.13 | 1.5 | 1 | 7 | 1 | 0 | 100% | 1 |
| 3G1X_U5P_A_229 | 100% | 48% | 0.021 | 0.996 | 1.08 | 0.92 | 1 | 2 | 0 | 0 | 100% | 1 |
| 9HDS_U5P_A_501 | 100% | 60% | 0.031 | 0.995 | 0.59 | 0.94 | - | 2 | 0 | 0 | 100% | 0.62 |
| 3W07_U5P_A_301 | 100% | 55% | 0.037 | 0.997 | 0.79 | 0.96 | - | - | 3 | 0 | 100% | 1 |
| 4MML_U5P_A_103 | 100% | 83% | 0.026 | 0.994 | 0.29 | 0.49 | - | - | 1 | 0 | 95% | 1 |
| 6YWU_U5P_A_501 | 100% | 40% | 0.036 | 0.994 | 1.2 | 1.13 | 2 | 1 | 0 | 0 | 100% | 1 |
