UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 3FBB designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3FBB_UDP_D_201 | 84% | 31% | 0.077 | 0.938 | 1.14 | 1.58 | 1 | 5 | 0 | 0 | 100% | 1 |
| 3FBB_UDP_E_201 | 83% | 31% | 0.076 | 0.935 | 1.14 | 1.57 | 2 | 6 | 1 | 0 | 100% | 1 |
| 3FBB_UDP_A_201 | 78% | 29% | 0.082 | 0.924 | 1.12 | 1.69 | 1 | 5 | 1 | 0 | 100% | 1 |
| 3FBB_UDP_C_201 | 75% | 35% | 0.09 | 0.923 | 1.06 | 1.5 | 1 | 6 | 1 | 0 | 100% | 1 |
| 3FBB_UDP_F_201 | 58% | 29% | 0.101 | 0.877 | 1.18 | 1.63 | 2 | 6 | 0 | 0 | 100% | 1 |
| 3FBB_UDP_B_201 | 56% | 31% | 0.107 | 0.879 | 1.1 | 1.64 | 1 | 4 | 2 | 0 | 100% | 1 |
| 3EIC_UDP_D_164 | 88% | 35% | 0.092 | 0.967 | 0.88 | 1.65 | 1 | 6 | 0 | 0 | 100% | 1 |
| 3FCW_UDP_D_138 | 78% | 35% | 0.124 | 0.968 | 0.92 | 1.61 | - | 6 | 7 | 0 | 100% | 1 |
| 8X3U_UDP_D_401 | 100% | 3% | 0.012 | 0.999 | 3.38 | 2.71 | 14 | 13 | 1 | 0 | 100% | 1 |
| 8X3Q_UDP_D_401 | 100% | 3% | 0.013 | 0.999 | 3.3 | 2.73 | 13 | 14 | 0 | 0 | 100% | 1 |
| 8VH8_UDP_B_704 | 100% | 61% | 0.03 | 0.994 | 0.59 | 0.91 | - | 1 | 0 | 0 | 100% | 1 |
| 2B69_UDP_A_900 | 100% | 42% | 0.032 | 0.992 | 1.03 | 1.21 | 2 | 4 | 0 | 0 | 100% | 1 |
| 4GYW_UDP_C_1101 | 100% | 37% | 0.037 | 0.988 | 1.03 | 1.45 | 2 | 4 | 0 | 0 | 100% | 1 |
