3IDY | pdb_00003idy


NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 3IDY designated by the RCSB
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Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
3IDY_NAG_A_789 62% 61% 0.15 0.9470.52 0.81 - -20100%1
3IDY_NAG_G_762 60% 48% 0.173 0.9630.62 1.27 - 220100%1
3IDY_NAG_G_886 60% 50% 0.155 0.9420.65 1.14 - 110100%1
3IDY_NAG_G_892 54% 56% 0.138 0.9040.58 0.97 - 100100%1
3IDY_NAG_A_795 50% 60% 0.179 0.9330.53 0.85 - 130100%1
3IDY_NAG_G_776 48% 56% 0.175 0.9220.46 1.05 - 100100%1
3IDY_NAG_G_789 47% 61% 0.189 0.9320.46 0.87 - -00100%1
3IDY_NAG_G_795 45% 65% 0.196 0.9330.51 0.68 - -00100%1
3IDY_NAG_A_886 44% 61% 0.195 0.9260.64 0.7 - -10100%1
3IDY_NAG_A_948 35% 52% 0.224 0.9210.5 1.22 - 300100%1
3IDY_NAG_A_762 35% 56% 0.256 0.9550.54 0.98 - 110100%1
3IDY_NAG_A_734 35% 59% 0.176 0.8650.48 0.94 - 110100%1
3IDY_NAG_G_734 32% 53% 0.203 0.8840.62 1.05 - 100100%1
3IDY_NAG_G_741 24% 59% 0.209 0.8450.43 0.98 - 100100%1
3IDY_NAG_A_741 22% 62% 0.223 0.8490.59 0.73 - -00100%1
3IDY_NAG_G_948 19% 30% 0.259 0.8620.42 2.23 - 400100%1
3IDY_NAG_G_839 18% 56% 0.272 0.8730.55 1 - 100100%1
3IDY_NAG_A_892 16% 51% 0.303 0.8920.64 1.11 - 100100%1
3IDY_NAG_A_776 16% 33% 0.259 0.8431.26 1.3 1 100100%1
3IDY_NAG_G_730 14% 60% 0.221 0.7830.46 0.92 - 100100%1
3IDY_NAG_G_963 2% 61% 0.486 0.8110.5 0.83 - 140100%1
3IDY_NAG_A_588 2% 43% 0.433 0.7340.59 1.5 - 340100%1
3IDY_NAG_A_730 1% 56% 0.326 0.567 0.53 1 - 200100%1
3IDY_NAG_A_839 1% 54% 0.551 0.7590.55 1.05 - 100100%1
3IDY_NAG_A_963 0% 53% 0.73 0.6330.58 1.08 - 200100%1
3IDY_NAG_G_588 0% 59% 0.794 0.424 0.53 0.89 - 101100%1
3IDY_NAG_A_856 0% 47% 0.608 0.035 0.54 1.37 - 100100%1
3IDY_NAG_G_856 0% 45% 1.434 -0.08 0.56 1.43 - 300100%1
3IDX_NAG_G_886 88% 55% 0.091 0.9720.63 0.96 - -00100%1
2NY6_NAG_A_762 82% 46% 0.114 0.9760.68 1.27 - 200100%1
2NY5_NAG_G_762 79% 55% 0.114 0.9650.62 0.97 - -00100%1
2NY0_NAG_A_762 77% 54% 0.123 0.9680.54 1.06 - 100100%1
2NY7_NAG_G_886 75% 59% 0.114 0.9530.27 1.13 - 300100%1
5LDS_NAG_C_1003 100% 65% 0.016 0.9970.55 0.64 - -30100%1
3H0C_NAG_A_796 100% 55% 0.02 0.9950.47 1.12 - 100100%1
5O5D_NAG_B_501 100% 60% 0.02 0.9950.38 0.97 - 100100%1
9OAR_NAG_C_202 100% 52% 0.021 0.9940.68 1.06 - 100100%1
6MUG_NAG_G_629 100% 72% 0.022 0.9940.35 0.58 - -00100%1