UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 4CJ8 designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with same target (top 5) |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
4CJ8_UDP_D_1237 | 63% | 29% | 0.096 | 0.889 | 1.11 | 1.72 | 2 | 7 | 11 | 0 | 100% | 1 |
4CJ8_UDP_K_1237 | 61% | 29% | 0.098 | 0.884 | 1.11 | 1.71 | 2 | 7 | 4 | 0 | 100% | 1 |
4CJ8_UDP_I_1237 | 48% | 30% | 0.114 | 0.857 | 1.11 | 1.65 | 2 | 7 | 2 | 0 | 100% | 1 |
4CJ8_UDP_M_1246 | 48% | 29% | 0.136 | 0.877 | 1.12 | 1.68 | 3 | 7 | 4 | 0 | 100% | 1 |
4CJ8_UDP_C_1237 | 43% | 29% | 0.103 | 0.824 | 1.12 | 1.71 | 2 | 7 | 5 | 0 | 100% | 1 |
4CJ8_UDP_N_1244 | 40% | 29% | 0.114 | 0.824 | 1.12 | 1.72 | 2 | 7 | 18 | 0 | 100% | 1 |
4CJ8_UDP_J_1237 | 37% | 31% | 0.118 | 0.815 | 1.11 | 1.63 | 2 | 7 | 2 | 0 | 100% | 1 |
4CJ8_UDP_B_1237 | 36% | 30% | 0.143 | 0.832 | 1.12 | 1.66 | 2 | 7 | 5 | 0 | 100% | 1 |
4CJ8_UDP_L_1237 | 35% | 31% | 0.117 | 0.801 | 1.11 | 1.62 | 2 | 7 | 2 | 0 | 100% | 1 |
4CJ8_UDP_A_1237 | 23% | 29% | 0.146 | 0.769 | 1.11 | 1.71 | 2 | 6 | 4 | 0 | 100% | 1 |
4CJC_UDP_D_1237 | 19% | 27% | 0.199 | 0.796 | 1.19 | 1.75 | 3 | 7 | 2 | 0 | 100% | 1 |
8X3Q_UDP_C_401 | 100% | 3% | 0.015 | 0.998 | 3.32 | 2.69 | 13 | 13 | 0 | 0 | 100% | 1 |
8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.31 | 2.68 | 13 | 13 | 2 | 0 | 100% | 1 |
8VH8_UDP_C_704 | 100% | 62% | 0.032 | 0.995 | 0.55 | 0.9 | - | 1 | 0 | 0 | 100% | 1 |
2B69_UDP_A_900 | 100% | 42% | 0.032 | 0.992 | 1.03 | 1.21 | 2 | 4 | 0 | 0 | 100% | 1 |
3H4T_UDP_A_604 | 100% | 42% | 0.039 | 0.99 | 1.01 | 1.22 | 2 | 3 | 0 | 0 | 100% | 1 |