UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 4II9 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4II9_UDP_B_101 | 98% | 16% | 0.06 | 0.986 | 1.32 | 2.34 | 4 | 7 | 0 | 0 | 96% | 1 |
| 7Z5Z_UDP_A_402 | 93% | 81% | 0.075 | 0.976 | 0.33 | 0.48 | - | - | 0 | 0 | 96% | 1 |
| 7Z6A_UDP_A_402 | 68% | 83% | 0.118 | 0.936 | 0.31 | 0.46 | - | - | 0 | 0 | 96% | 1 |
| 7Z6K_UDP_A_402 | 60% | 79% | 0.121 | 0.913 | 0.28 | 0.57 | - | - | 0 | 0 | 96% | 1 |
| 7Z5Y_UDP_A_402 | 48% | 79% | 0.142 | 0.892 | 0.34 | 0.52 | - | - | 0 | 0 | 96% | 1 |
| 8X3U_UDP_D_401 | 100% | 3% | 0.012 | 0.999 | 3.38 | 2.71 | 14 | 13 | 1 | 0 | 100% | 1 |
| 8X3Q_UDP_D_401 | 100% | 3% | 0.013 | 0.999 | 3.3 | 2.73 | 13 | 14 | 0 | 0 | 100% | 1 |
| 8VH8_UDP_B_704 | 100% | 61% | 0.03 | 0.994 | 0.59 | 0.91 | - | 1 | 0 | 0 | 100% | 1 |
| 2B69_UDP_A_900 | 100% | 42% | 0.032 | 0.992 | 1.03 | 1.21 | 2 | 4 | 0 | 0 | 100% | 1 |
| 4GYW_UDP_C_1101 | 100% | 37% | 0.037 | 0.988 | 1.03 | 1.45 | 2 | 4 | 0 | 0 | 100% | 1 |
