GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 5CJ2 designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5CJ2_GDP_A_301 | 92% | 40% | 0.078 | 0.97 | 0.93 | 1.38 | - | 7 | 2 | 0 | 100% | 1 |
| 5CJ2_GDP_C_301 | 92% | 37% | 0.082 | 0.974 | 1.15 | 1.3 | 2 | 6 | 0 | 0 | 100% | 1 |
| 5CJ2_GDP_B_301 | 92% | 33% | 0.087 | 0.976 | 1.32 | 1.35 | 2 | 6 | 0 | 0 | 100% | 1 |
| 5CJ2_GDP_E_301 | 90% | 43% | 0.085 | 0.969 | 1.08 | 1.14 | 1 | 3 | 0 | 0 | 100% | 1 |
| 5CJ2_GDP_F_301 | 90% | 49% | 0.093 | 0.977 | 1 | 0.98 | 2 | - | 1 | 0 | 100% | 1 |
| 5CJ2_GDP_D_301 | 88% | 32% | 0.094 | 0.969 | 1.39 | 1.33 | 4 | 5 | 2 | 0 | 100% | 1 |
| 5CJ2_GDP_H_301 | 83% | 42% | 0.103 | 0.96 | 0.98 | 1.26 | - | 2 | 2 | 0 | 100% | 1 |
| 5CJ2_GDP_G_301 | 76% | 46% | 0.111 | 0.946 | 0.89 | 1.19 | 1 | 3 | 4 | 0 | 100% | 1 |
| 3GJ0_GDP_A_302 | 99% | 48% | 0.061 | 0.988 | 1 | 0.99 | 1 | 1 | 0 | 0 | 100% | 1 |
| 5CIW_GDP_A_301 | 98% | 40% | 0.06 | 0.983 | 0.85 | 1.48 | - | 3 | 0 | 0 | 100% | 1 |
| 3GJ8_GDP_A_302 | 98% | 48% | 0.067 | 0.987 | 0.94 | 1.08 | 1 | 3 | 0 | 0 | 100% | 1 |
| 5CIQ_GDP_A_301 | 97% | 41% | 0.068 | 0.983 | 1 | 1.29 | 1 | 4 | 0 | 0 | 100% | 1 |
| 5CIT_GDP_A_301 | 95% | 38% | 0.073 | 0.979 | 1.1 | 1.32 | 3 | 5 | 1 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 46% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3K_GDP_A_201 | 100% | 39% | 0.016 | 0.998 | 1.17 | 1.21 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3L_GDP_A_201 | 100% | 49% | 0.021 | 0.997 | 0.91 | 1.04 | 1 | 1 | 0 | 0 | 100% | 1 |
| 9C3N_GDP_A_202 | 100% | 38% | 0.017 | 0.998 | 1.36 | 1.06 | 3 | 1 | 0 | 0 | 100% | 1 |














