XYS: alpha-D-xylopyranose
XYS is a Ligand Of Interest in 5NH7 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5NH7_XYS_C_505 | 49% | 49% | 0.167 | 0.913 | 0.84 | 1.13 | - | 2 | 1 | 0 | 100% | 1 |
| 5NH7_XYS_D_505 | 29% | 49% | 0.203 | 0.862 | 0.95 | 1.03 | 1 | - | 1 | 0 | 100% | 1 |
| 5NH7_XYS_B_505 | 24% | 54% | 0.244 | 0.873 | 0.64 | 1.14 | - | 1 | 0 | 0 | 100% | 1 |
| 5NH7_XYS_B_507 | 21% | 41% | 0.214 | 0.825 | 0.53 | 1.72 | - | 3 | 0 | 0 | 100% | 1 |
| 5NH7_XYS_A_506 | 20% | 41% | 0.196 | 0.798 | 0.6 | 1.66 | - | 3 | 0 | 0 | 100% | 1 |
| 5NH7_XYS_D_506 | 17% | 52% | 0.28 | 0.859 | 0.97 | 0.89 | - | 1 | 0 | 0 | 100% | 1 |
| 5NH7_XYS_B_506 | 14% | 59% | 0.306 | 0.856 | 0.82 | 0.74 | - | - | 0 | 0 | 100% | 1 |
| 5NH7_XYS_A_505 | 10% | 44% | 0.308 | 0.816 | 1.02 | 1.14 | - | 1 | 0 | 0 | 100% | 1 |
| 5NHD_XYS_D_504 | 43% | 42% | 0.177 | 0.899 | 0.91 | 1.35 | - | 2 | 0 | 0 | 100% | 1 |
| 8BQA_XYS_AAA_402 | 88% | 34% | 0.058 | 0.951 | 0.83 | 1.77 | - | 3 | 0 | 0 | 90% | 1 |
| 6B6Q_XYS_A_306 | 73% | 51% | 0.09 | 0.915 | 1.43 | 0.48 | 1 | - | 0 | 0 | 100% | 1 |
| 3VSV_XYS_B_708 | 45% | 44% | 0.171 | 0.901 | 1.43 | 0.76 | 1 | - | 0 | 0 | 100% | 1 |
| 5GLN_XYS_B_500 | 43% | 49% | 0.148 | 0.87 | 0.78 | 1.19 | 1 | 1 | 0 | 0 | 100% | 1 |
| 7KNC_XYS_A_1002 | 33% | 30% | 0.176 | 0.854 | 2.01 | 0.8 | 2 | - | 0 | 0 | 100% | 1 |
